The genomic region of the 3' untranslated region (3'UTR) of PHO84, rather than the antisense RNA, promotes gene repression.

Autor: Hegazy YA; Department of Biochemistry, Purdue University, BCHM A343, 175 S. University Street, West Lafayette, IN 47907-2063, USA., Cloutier SC; Department of Biochemistry, Purdue University, BCHM A343, 175 S. University Street, West Lafayette, IN 47907-2063, USA., Utturkar SM; Purdue University Institute for Cancer Research, Purdue University, Hansen Life Sciences Research Building, Room 141, 201 S. University Street West Lafayette, IN 47907-2064, USA., Das S; Department of Biochemistry, Purdue University, BCHM A343, 175 S. University Street, West Lafayette, IN 47907-2063, USA., Tran EJ; Department of Biochemistry, Purdue University, BCHM A343, 175 S. University Street, West Lafayette, IN 47907-2063, USA.; Purdue University Institute for Cancer Research, Purdue University, Hansen Life Sciences Research Building, Room 141, 201 S. University Street West Lafayette, IN 47907-2064, USA.

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2023 Aug 25; Vol. 51 (15), pp. 7900-7913.

The DEAD-box protein Dbp2p is linked to noncoding RNAs, the helicase Sen1p, and R-loops.

Autor: Tedeschi FA; Center for RNA Science and Therapeutics, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106, USA., Cloutier SC; Department of Biochemistry, Purdue University, West Lafayette, Indiana 47907, USA., Tran EJ; Department of Biochemistry, Purdue University, West Lafayette, Indiana 47907, USA., Jankowsky E; Center for RNA Science and Therapeutics, School of Medicine, Case Western Reserve University, Cleveland, Ohio 44106, USA.

Publikováno v: RNA (New York, N.Y.) [RNA] 2018 Dec; Vol. 24 (12), pp. 1693-1705. Date of Electronic Publication: 2018 Sep 27.

Regulated Formation of lncRNA-DNA Hybrids Enables Faster Transcriptional Induction and Environmental Adaptation.

Autor: Cloutier SC; Department of Biochemistry, Purdue University, BCHM 305, 175 S. University Street, West Lafayette, IN 47907, USA., Wang S; Department of Biochemistry, Purdue University, BCHM 305, 175 S. University Street, West Lafayette, IN 47907, USA., Ma WK; Department of Biochemistry, Purdue University, BCHM 305, 175 S. University Street, West Lafayette, IN 47907, USA., Al Husini N; Department of Biological Sciences, 5047 Gullen Mall, Wayne State University, Detroit, MI 48202, USA., Dhoondia Z; Department of Biological Sciences, 5047 Gullen Mall, Wayne State University, Detroit, MI 48202, USA., Ansari A; Department of Biological Sciences, 5047 Gullen Mall, Wayne State University, Detroit, MI 48202, USA., Pascuzzi PE; Department of Biochemistry, Purdue University, BCHM 305, 175 S. University Street, West Lafayette, IN 47907, USA; Purdue University Center for Cancer Research, Purdue University, Hansen Life Sciences Research Building, Room 141, 201 S. University Street, West Lafayette, IN 47907, USA; Purdue University Libraries, 504 W. State Street, West Lafayette, IN 47907, USA. Electronic address: ppascuzz@purdue.edu., Tran EJ; Department of Biochemistry, Purdue University, BCHM 305, 175 S. University Street, West Lafayette, IN 47907, USA; Purdue University Center for Cancer Research, Purdue University, Hansen Life Sciences Research Building, Room 141, 201 S. University Street, West Lafayette, IN 47907, USA. Electronic address: ejtran@purdue.edu.

Publikováno v: Molecular cell [Mol Cell] 2016 Feb 04; Vol. 61 (3), pp. 393-404. Date of Electronic Publication: 2016 Jan 28.

Long noncoding RNAs promote transcriptional poising of inducible genes.

Autor: Cloutier SC; Department of Biochemistry, Purdue University, West Lafayette, Indiana, United States of America., Wang S, Ma WK, Petell CJ, Tran EJ

Publikováno v: PLoS biology [PLoS Biol] 2013 Nov; Vol. 11 (11), pp. e1001715. Date of Electronic Publication: 2013 Nov 19.

The DEAD-box RNA helicase Dbp2 connects RNA quality control with repression of aberrant transcription.

Autor: Cloutier SC; Department of Biochemistry and Purdue Cancer Center, Purdue University, West Lafayette, Indiana 47907-2063, USA., Ma WK, Nguyen LT, Tran EJ

Publikováno v: The Journal of biological chemistry [J Biol Chem] 2012 Jul 27; Vol. 287 (31), pp. 26155-66. Date of Electronic Publication: 2012 Jun 07.