Detection of Enriched T Cell Epitope Specificity in Full T Cell Receptor Sequence Repertoires

Autor: Sofie Gielis, Pieter Moris, Wout Bittremieux, Nicolas De Neuter, Benson Ogunjimi, Kris Laukens, Pieter Meysman

Publikováno v: Frontiers in Immunology, Vol 10 (2019)
Frontiers in Immunology
Frontiers in immunology

High-throughput T cell receptor (TCR) sequencing allows the characterization of an individual's TCR repertoire and directly queries their immune state. However, it remains a non-trivial task to couple these sequenced TCRs to their antigenic targets.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::984ec02a7c478ddf5a2f71e808062a9a
https://www.frontiersin.org/article/10.3389/fimmu.2019.02820/full

Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage

Autor: Amps, K., Andrews, P.W., Anyfantis, G., Armstrong, L., Avery, S., Baharvand, H., Baker, J., Baker, D., Munoz, M.B., Beil, S., Benvenisty, N., Ben-Yosef, D., Biancotti, J.C., Bosman, A., Brena, R.M., Brison, D., Caisander, G., Camarasa, M.V., Chen, J.M., Chiao, E., Choi, Y.M., Choo, A.B.H., Collins, D., Colman, A., Crook, J.M., Daley, G.Q., Dalton, A., Sousa, P.A. de, Denning, C., Downie, J., Dvorak, P., Montgomery, K.D., Feki, A., Ford, A., Fox, V., Fraga, A.M., Frumkin, T., Ge, L., Gokhale, P.J., Golan-Lev, T., Gourabi, H., Gropp, M., Lu, G.X., Hampl, A., Harron, K., Healy, L., Herath, W., Holm, F., Hovatta, O., Hyllner, J., Inamdar, M.S., Irwanto, A.K., Ishii, T., Jaconi, M., Jin, Y., Kimber, S., Kiselev, S., Knowles, B.B., Kopper, O., Kukharenko, V., Kuliev, A., Lagarkova, M.A., Laird, P.W., Lako, M., Laslett, A.L., Lavon, N., Lee, D.R., Lee, J.E., Li, C.L., Lim, L.S., Ludwig, T.E., Ma, Y., Maltby, E., Mateizel, I., Mayshar, Y., Mileikovsky, M., Minger, S.L., Miyazaki, T., Moon, S.Y., Moore, H., Mummery, C., Nagy, A., Nakatsuji, N., Narwani, K., Oh, S.K.W., Oh, S.K., Olson, C., Otonkoski, T., Pan, F., Park, I.H., Pells, S., Pera, M.F., Pereira, L.V., Qi, O., Raj, G.S., Reubinoff, B., Robins, A., Robson, P., Rossant, J., Salekdeh, G.H., Schulz, T.C., Sermon, K., Mohamed, J.S., Shen, H., Sherrer, E., Sidhu, K., Sivarajah, S., Skottman, H., Spits, C., Stacey, G.N., Strehl, R., Strelchenko, N., Suemori, H., Sun, B.W., Suuronen, R., Takahashi, K., Tuuri, T., Venu, P., Verlinsky, Y., Ward-van Oostwaard, D., Weisenberger, D.J., Wu, Y., Yamanaka, S., Young, L., Zhou, Q., Int Stem Cell Initiative

Publikováno v: Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Nature Biotechnology, 29(12), 1132-U113
Nature Biotechnology, Vol. 29, No 12 (2011) pp. 1132-44
Amps, K, Andrews, P W, Anyfantis, G, Armstrong, L, Avery, S, Baharvand, H, Baker, J, Baker, D, Munoz, M B, Beil, S, Benvenisty, N, Ben-Yosef, D, Biancotti, J-C, Bosman, A, Brena, R M, Brison, D, Caisander, G, Camarasa, M V, Chen, J, Chiao, E, Choi, Y M, Choo, A B H, Collins, D, Colman, A, Crook, J M, Daley, G Q, Dalton, A, De Sousa, P A, Denning, C, Downie, J, Dvorak, P, Montgomery, K D, Feki, A, Ford, A, Fox, V, Fraga, A M, Frumkin, T, Ge, L, Gokhale, P J, Golan-Lev, T, Gourabi, H, Gropp, M, Lu, G, Hampl, A, Harron, K, Healy, L, Herath, W, Holm, F & Hovatta, O & Pells, S 2011, ' Screening ethnically diverse human embryonic stem cells identifies a chromosome 20 minimal amplicon conferring growth advantage ', Nature Biotechnology, vol. 29, no. 12, pp. 1132-1144 . https://doi.org/10.1038/nbt.2051

The International Stem Cell Initiative analyzed 125 human embryonic stem (ES) cell lines and 11 induced pluripotent stem (iPS) cell lines, from 38 laboratories worldwide, for genetic changes occurring during culture. Most lines were analyzed at an ea

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::06b428d050883246d8803f9c6385d8ff
https://doi.org/10.1038/nbt.2051