Zobrazeno 1 - 10
of 42
pro vyhledávání: '"Clayton K Collings"'
DYRK1A promotes viral entry of highly pathogenic human coronaviruses in a kinase-independent manner.
Autor:
Madison S Strine, Wesley L Cai, Jin Wei, Mia Madel Alfajaro, Renata B Filler, Scott B Biering, Sylvia Sarnik, Ryan D Chow, Ajinkya Patil, Kasey S Cervantes, Clayton K Collings, Peter C DeWeirdt, Ruth E Hanna, Kevin Schofield, Christopher Hulme, Silvana Konermann, John G Doench, Patrick D Hsu, Cigall Kadoch, Qin Yan, Craig B Wilen
Publikováno v:
PLoS Biology, Vol 21, Iss 6, p e3002097 (2023)
Identifying host genes essential for Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) has the potential to reveal novel drug targets and further our understanding of Coronavirus Disease 2019 (COVID-19). We previously performed a genome-wi
Externí odkaz:
https://doaj.org/article/c10dd58b10dd439eb9610eccf28fbb91
Publikováno v:
PLoS ONE, Vol 14, Iss 12, p e0216515 (2019)
The HIV genome is rich in A but not G or U and deficient in C. This nucleotide bias controls HIV phenotype by determining the highly unusual composition of all major HIV proteins. The bias is also responsible for the high frequency of narrow DNA mino
Externí odkaz:
https://doaj.org/article/10cc041fbcd3457688281cd4455ee5ad
Publikováno v:
PLoS ONE, Vol 5, Iss 6, p e10933 (2010)
To gain a better understanding of the sequence patterns that characterize positioned nucleosomes, we first performed an analysis of the periodicities of the 256 tetranucleotides in a yeast genome-wide library of nucleosomal DNA sequences that was pre
Externí odkaz:
https://doaj.org/article/6336e6c4ee3941a1be223c2fa5f9d714
Autor:
Jin Wei, Ajinkya Patil, Clayton K. Collings, Mia Madel Alfajaro, Yu Liang, Wesley L. Cai, Madison S. Strine, Renata B. Filler, Peter C. DeWeirdt, Ruth E. Hanna, Bridget L. Menasche, Arya Ökten, Mario A. Peña-Hernández, Jon Klein, Andrew McNamara, Romel Rosales, Briana L. McGovern, M. Luis Rodriguez, Adolfo García-Sastre, Kris M. White, Yiren Qin, John G. Doench, Qin Yan, Akiko Iwasaki, Thomas P. Zwaka, Jun Qi, Cigall Kadoch, Craig B. Wilen
Publikováno v:
Nature Genetics. 55:471-483
Identification of host determinants of coronavirus infection informs mechanisms of viral pathogenesis and can provide new drug targets. Here we demonstrate that mammalian SWItch/Sucrose Non-Fermentable (mSWI/SNF) chromatin remodeling complexes, speci
Autor:
Gloria Mas, Na Man, Yuichiro Nakata, Concepcion Martinez-Caja, Daniel L. Karl, Felipe Beckedorff, Francesco Tamiro, Chuan Chen, Stephanie Duffort, Hidehiro Itonaga, Adnan K. Mookhtiar, Kranthi Kunkalla, Alfredo M. Valencia, Clayton K. Collings, Cigall Kadoch, Francisco Vega, Scott C. Kogan, Lluis Morey, Daniel Bilbao, Stephen D. Nimer
Publikováno v:
Journal of Clinical Investigation.
Autor:
Clayton K. Collings, John N. Anderson
Publikováno v:
Epigenetics & Chromatin, Vol 10, Iss 1, Pp 1-19 (2017)
Abstract Background DNA methylation is an epigenetic modification that is enriched in heterochromatin but depleted at active promoters and enhancers. However, the debate on whether or not DNA methylation is a reliable indicator of high nucleosome occ
Externí odkaz:
https://doaj.org/article/92befedab0934f51b557a2a968bac945
Autor:
Panagiotis Ntziachristos, Ali Shilatifard, John D. Crispino, Suresh Kumar, Joseph Weinstock, Neil L. Kelleher, Giuseppe Basso, Benedetta Accordi, Maddalena Paganin, Silvia Bresolin, Valentina Serafin, Beat Bornhauser, Jean-Pierre Bourquin, Irawati Kandela, Christine Mantis, Beatrix Ueberheide, Stephen Kelly, Alexandros Strikoudis, Pieter Van Vlierberghe, Clayton K. Collings, Elizabeth T. Bartom, Radhika Rawat, Lu Wang, Yoh-hei Takahashi, Emily J. Rendleman, Stacy A. Marshall, Steven Goosens, Geert Berx, Niels Vandamme, Sofie Peirs, Nobuko Hijiya, Nebiyu A. Abshiru, Young Ah Goo, Paul M. Thomas, Ivan Sokirniy, Hui Wang, Charles Grove, Jian Wu, Feng Wang, Andrew G. Volk, Megan R. Johnson, Kenneth K. Wang, Blanca T. Gutierrez-Diaz, Yixing Zhu, Kelly M. Arcipowski, Carlos A. Martinez, Qi Jin
Supplementary Table 1
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2058d90704989c35c0a745444483d25a
https://doi.org/10.1158/1078-0432.22474514.v1
https://doi.org/10.1158/1078-0432.22474514.v1
Autor:
Panagiotis Ntziachristos, Ali Shilatifard, John D. Crispino, Suresh Kumar, Joseph Weinstock, Neil L. Kelleher, Giuseppe Basso, Benedetta Accordi, Maddalena Paganin, Silvia Bresolin, Valentina Serafin, Beat Bornhauser, Jean-Pierre Bourquin, Irawati Kandela, Christine Mantis, Beatrix Ueberheide, Stephen Kelly, Alexandros Strikoudis, Pieter Van Vlierberghe, Clayton K. Collings, Elizabeth T. Bartom, Radhika Rawat, Lu Wang, Yoh-hei Takahashi, Emily J. Rendleman, Stacy A. Marshall, Steven Goosens, Geert Berx, Niels Vandamme, Sofie Peirs, Nobuko Hijiya, Nebiyu A. Abshiru, Young Ah Goo, Paul M. Thomas, Ivan Sokirniy, Hui Wang, Charles Grove, Jian Wu, Feng Wang, Andrew G. Volk, Megan R. Johnson, Kenneth K. Wang, Blanca T. Gutierrez-Diaz, Yixing Zhu, Kelly M. Arcipowski, Carlos A. Martinez, Qi Jin
Supplementary Table 2
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8040eda2b2a48513957d580845241b7e
https://doi.org/10.1158/1078-0432.22474511.v1
https://doi.org/10.1158/1078-0432.22474511.v1
Autor:
Panagiotis Ntziachristos, Ali Shilatifard, John D. Crispino, Suresh Kumar, Joseph Weinstock, Neil L. Kelleher, Giuseppe Basso, Benedetta Accordi, Maddalena Paganin, Silvia Bresolin, Valentina Serafin, Beat Bornhauser, Jean-Pierre Bourquin, Irawati Kandela, Christine Mantis, Beatrix Ueberheide, Stephen Kelly, Alexandros Strikoudis, Pieter Van Vlierberghe, Clayton K. Collings, Elizabeth T. Bartom, Radhika Rawat, Lu Wang, Yoh-hei Takahashi, Emily J. Rendleman, Stacy A. Marshall, Steven Goosens, Geert Berx, Niels Vandamme, Sofie Peirs, Nobuko Hijiya, Nebiyu A. Abshiru, Young Ah Goo, Paul M. Thomas, Ivan Sokirniy, Hui Wang, Charles Grove, Jian Wu, Feng Wang, Andrew G. Volk, Megan R. Johnson, Kenneth K. Wang, Blanca T. Gutierrez-Diaz, Yixing Zhu, Kelly M. Arcipowski, Carlos A. Martinez, Qi Jin
Supplementary Figs. 1-17 with legends
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5364415669a33c62d69399508aeb1fb1
https://doi.org/10.1158/1078-0432.22474517
https://doi.org/10.1158/1078-0432.22474517
Autor:
Panagiotis Ntziachristos, Ali Shilatifard, John D. Crispino, Suresh Kumar, Joseph Weinstock, Neil L. Kelleher, Giuseppe Basso, Benedetta Accordi, Maddalena Paganin, Silvia Bresolin, Valentina Serafin, Beat Bornhauser, Jean-Pierre Bourquin, Irawati Kandela, Christine Mantis, Beatrix Ueberheide, Stephen Kelly, Alexandros Strikoudis, Pieter Van Vlierberghe, Clayton K. Collings, Elizabeth T. Bartom, Radhika Rawat, Lu Wang, Yoh-hei Takahashi, Emily J. Rendleman, Stacy A. Marshall, Steven Goosens, Geert Berx, Niels Vandamme, Sofie Peirs, Nobuko Hijiya, Nebiyu A. Abshiru, Young Ah Goo, Paul M. Thomas, Ivan Sokirniy, Hui Wang, Charles Grove, Jian Wu, Feng Wang, Andrew G. Volk, Megan R. Johnson, Kenneth K. Wang, Blanca T. Gutierrez-Diaz, Yixing Zhu, Kelly M. Arcipowski, Carlos A. Martinez, Qi Jin
Purpose:T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive disease, affecting children and adults. Chemotherapy treatments show high response rates but have debilitating effects and carry risk of relapse. Previous work implicated NOTCH1 and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0deb9c0766a8681e877d3398d1315853
https://doi.org/10.1158/1078-0432.c.6528809.v1
https://doi.org/10.1158/1078-0432.c.6528809.v1