Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Claudio Lorenzi"'
Autor:
Claudio Lorenzi, Sylvain Barriere, Katharina Arnold, Reini F. Luco, Andrew J. Oldfield, William Ritchie
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-13 (2021)
Abstract Accurate quantification and detection of intron retention levels require specialized software. Building on our previous software, we create a suite of tools called IRFinder-S, to analyze and explore intron retention events in multiple sample
Externí odkaz:
https://doaj.org/article/6aefeefa1b79441d91cb3a8aab7fe382
Autor:
Jean-Philippe Villemin, Claudio Lorenzi, Marie-Sarah Cabrillac, Andrew Oldfield, William Ritchie, Reini F. Luco
Publikováno v:
BMC Biology, Vol 19, Iss 1, Pp 1-19 (2021)
Abstract Background Breast cancer is amongst the 10 first causes of death in women worldwide. Around 20% of patients are misdiagnosed leading to early metastasis, resistance to treatment and relapse. Many clinical and gene expression profiles have be
Externí odkaz:
https://doaj.org/article/4eaadcae7c514907b1f1dfa56b8108c6
Autor:
Claudio Lorenzi, Sylvain Barriere, Jean-Philippe Villemin, Laureline Dejardin Bretones, Alban Mancheron, William Ritchie
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Abstract iMOKA (interactive multi-objective k-mer analysis) is a software that enables comprehensive analysis of sequencing data from large cohorts to generate robust classification models or explore specific genetic elements associated with disease
Externí odkaz:
https://doaj.org/article/657a9813fae846e0823e869ad4951436
Publikováno v:
Postal Strategies ISBN: 9783031253614
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ca5c9121e1e3e492deed8d0ae5087e60
https://doi.org/10.1007/978-3-031-25362-1_3
https://doi.org/10.1007/978-3-031-25362-1_3
Autor:
Elena Lo Furno, Isabelle Busseau, Antoine Aze, Claudio Lorenzi, Cima Saghira, Matt C Danzi, Stephan Zuchner, Domenico Maiorano
Publikováno v:
Nucleic Acids Research
In early embryogenesis of fast cleaving embryos, DNA synthesis is short and surveillance mechanisms preserving genome integrity are inefficient, implying the possible generation of mutations. We have analyzed mutagenesis in Xenopus laevis and Drosoph
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a0a56c5aea1f78e5140d8f4f77ae942
http://europepmc.org/articles/PMC8789082
http://europepmc.org/articles/PMC8789082
Autor:
Shuji Sakamoto, Victor Mac, Claudio Lorenzi, Rosemary Kiernan, Jérôme Barbier, William Ritchie, Takuma Higuchi, Giuseppa Grasso, Maxime Bello, Marion Helsmoortel, Gabriel Sanchez
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2020, 48 (12), pp.6874-6888. ⟨10.1093/nar/gkaa386⟩
Nucleic Acids Research, Oxford University Press, 2020, 48 (12), pp.6874-6888. ⟨10.1093/nar/gkaa386⟩
MicroRNAs (miRNAs) are predicted to regulate the expression of >60% of mammalian genes and play fundamental roles in most biological processes. Deregulation of miRNA expression is a hallmark of most cancers and further investigation of mechanisms con
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a9d1c120636569ae4c1aae0101b17fe
http://europepmc.org/articles/PMC7337520
http://europepmc.org/articles/PMC7337520
Autor:
Reini F. Luco, Andrew J. Oldfield, Claudio Lorenzi, Sylvain Barriere, Katharina Arnold, William Ritchie
Publikováno v:
Genome Biology
Genome Biology, BioMed Central, 2021, 22 (1), ⟨10.1186/s13059-021-02515-8⟩
Genome Biology, Vol 22, Iss 1, Pp 1-13 (2021)
Genome Biology, BioMed Central, 2021, 22 (1), ⟨10.1186/s13059-021-02515-8⟩
Genome Biology, Vol 22, Iss 1, Pp 1-13 (2021)
Accurate quantification and detection of intron retention levels require specialized software. Building on our previous software, we create a suite of tools called IRFinder-S, to analyze and explore intron retention events in multiple samples. Specif
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5a7b0dafb47cdff837f49b953cb5366a
http://europepmc.org/articles/PMC8573998
http://europepmc.org/articles/PMC8573998
Autor:
Marie-Sarah Cabrillac, Jean-Philippe Villemin, William Ritchie, Claudio Lorenzi, Andrew J. Oldfield, Reini F. Luco
Publikováno v:
BMC Biology
BMC Biology, BioMed Central, 2021, 19 (1), ⟨10.1186/s12915-021-01002-7⟩
BMC Biology, Vol 19, Iss 1, Pp 1-19 (2021)
BMC Biology, BioMed Central, 2021, 19 (1), ⟨10.1186/s12915-021-01002-7⟩
BMC Biology, Vol 19, Iss 1, Pp 1-19 (2021)
Background Breast cancer is amongst the 10 first causes of death in women worldwide. Around 20% of patients are misdiagnosed leading to early metastasis, resistance to treatment and relapse. Many clinical and gene expression profiles have been succes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b4406829c5d03d85b4ab79ae3a0c44d
https://doi.org/10.1186/s12915-021-01002-7
https://doi.org/10.1186/s12915-021-01002-7
Autor:
William Ritchie, Sylvain Barriere, Laureline Dejardin Bretones, Alban Mancheron, Jean-Philippe Villemin, Claudio Lorenzi
Publikováno v:
Genome Biology
Genome Biology, BioMed Central, 2020, 21 (1), ⟨10.1186/s13059-020-02165-2⟩
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
Genome Biology, BioMed Central, 2020, 21 (1), ⟨10.1186/s13059-020-02165-2⟩
Genome Biology, Vol 21, Iss 1, Pp 1-19 (2020)
iMOKA (interactive multi-objective k-mer analysis) is a software that enables comprehensive analysis of sequencing data from large cohorts to generate robust classification models or explore specific genetic elements associated with disease etiology.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3dd80170a12753dfd104e2dc6eec82a7
http://europepmc.org/articles/PMC7552494
http://europepmc.org/articles/PMC7552494
Most of the protein biological functions occur through contacts with other proteins or ligands. The residues that constitute the contact surface of a ligand-binding pocket are usually located far away within its sequence. Therefore, the identificatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e0c6b56f770587131cbe8a864f5f6c0f
https://doi.org/10.1101/2020.04.15.042655
https://doi.org/10.1101/2020.04.15.042655