Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Autor: Caroline Belser, Julie Poulain, Karine Labadie, Frederick Gavory, Adriana Alberti, Julie Guy, Quentin Carradec, Corinne Cruaud, Corinne Da Silva, Stefan Engelen, Paul Mielle, Aude Perdereau, Gaelle Samson, Shahinaz Gas, Genoscope Technical Team, Christian R. Voolstra, Pierre E. Galand, J. Michel Flores, Benjamin C. C. Hume, Gabriela Perna, Maren Ziegler, Hans-Joachim Ruscheweyh, Emilie Boissin, Sarah Romac, Guillaume Bourdin, Guillaume Iwankow, Clémentine Moulin, David A. Paz García, Sylvain Agostini, Bernard Banaigs, Emmanuel Boss, Chris Bowler, Colomban de Vargas, Eric Douville, Didier Forcioli, Paola Furla, Eric Gilson, Fabien Lombard, Stéphane Pesant, Stéphanie Reynaud, Shinichi Sunagawa, Olivier P. Thomas, Romain Troublé, Rebecca Vega Thurber, Didier Zoccola, Claude Scarpelli, E’ Krame Jacoby, Pedro H. Oliveira, Jean-Marc Aury, Denis Allemand, Serge Planes, Patrick Wincker

Publikováno v: Scientific Data, Vol 10, Iss 1, Pp 1-19 (2023)

Abstract Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmental stresses. Key to coral resilience are the symbiotic interac

Externí odkaz: https://doaj.org/article/31e028a14ccc4d68b96d0c2f46411c48

Integrative omics framework for characterization of coral reef ecosystems from the Tara Pacific expedition

Autor: Caroline Belser, Julie Poulain, Karine Labadie, Frederick Gavory, Adriana Alberti, Julie Guy, Quentin Carradec, Corinne Cruaud, Corinne da Silva, Stefan Engelen, Paul Mielle, Aude Perdereau, Gaelle Samson, Shahinaz Gas, Genoscope Technical Team, Voolstra, Christian R., Galand, Pierre E., Michel Flores, J., Benjamin Cc Hume, Gabriela Perna, Maren Ziegler, Hans-Joachim Ruscheweyh, Emilie Boissin, Sarah Romac, Guillaume Bourdin, Guillaume Iwankow, Clémentine Moulin, Paz García, David A., Sylvain Agostini, Bernard Banaigs, Emmanuel Boss, Chris Bowler, Colomban de Vargas, Éric Douville, Didier Forcioli, Paola Furla, Éric Gilson, Fabien Lombard, Stephane Pesant, Stéphanie Reynaud, Shinichi Sunagawa, Olivier Thomas, Romain Troublé, Rebecca Vega Thurber, Didier Zoccola, Claude Scarpelli, Krame Jacoby, E., Oliveira, Pedro H., Jean-Marc Aury, Denis Allemand, Serge Planes, Patrick Wincker

Publikováno v: HAL

Coral reef science is a fast-growing field propelled by the need to better understand coral health and resilience to devise strategies to slow reef loss resulting from environmental stresses. Key to coral resilience are the symbiotic interactions est

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7563dc5406d59ff4ecd94a674092ab20

The Medicago Genome Provides Insight into the Evolution of Rhizobial Symbioses

Autor: Claude Scarpelli, Thomas Schiex, Ghislaine Magdelenat, Michael K. Udvardi, Baifang Qin, Xinbin Dai, Jeff J. Doyle, Patrick X. Zhao, Hélène Bergès, Vagner A. Benedito, Arvind K. Bharti, Chrystel Gibelin, Dong-Hoon Jeong, Stéphane De Mita, Stephane Rombauts, Mingyi Wang, Nathalie Choisne, Simone L. Macmil, Patrick Wincker, Senjuti Sinharoy, Sylvie Samain, Christopher D. Town, Susan R. Singer, Heidrun Gundlach, Anne Berger, Jane Rogers, Kathrin Klee, Sarah Sims, Nevin D. Young, Stéphanie Fouteau, Claire Riddle, Iryna Sanders, John Gish, Limei Yang, René Geurts, Gregory D. May, Shiguo Zhou, Shweta Deshpande, David C. Schwartz, Anika Jöcker, Christine Nicholson, Ton Bisseling, Klaus F. X. Mayer, Antoine Zuber, Roxanne Denny, Chunting Lang, Carolien Franken, Douglas R. Cook, Ruihua Shi, Frédéric Debellé, Valérie Barbe, Giles E. D. Oldroyd, Foo Cheung, Lucy Matthews, Blake C. Meyers, Jeremy D. Murray, Dong-Jin Kim, Joann Mudge, Agnès Viollet, Heiko Schoof, Graham B. Wiley, Benjamin D. Rosen, Jean Dénarié, Florent Prion, Keqin Wang, Arnaud Bellec, Béatrice Segurens, Jeong Hwan Mun, Ernest F. Retzel, Sean Humphray, Andrew Farmer, D. Janine Sherrier, Lieven Sterck, Richard A. Dixon, Steven B. Cannon, Steve Kenton, Philippe Bardou, Alvaro J. González, Haibao Tang, Julie Poulain, Arnaud Couloux, Majesta O'Bleness, Pamela J. Green, Manuel Spannagl, Shelby L. Bidwell, Jixian Zhai, Asis Hallab, Anne Marie Dudez, Michael Bechner, Marina Naoumkina, James D. White, Francis Quetier, Marijke Hartog, Erin L. Monaghan, Charles Paule, Chunmei Qu, Andrew J. Severin, Céline Noirot, Fu Ying, Shaoping Lin, Ziyun Yao, Vivek Krishnakumar, Steven A. Goldstein, Axin Hua, Erika Sallet, Bing Bing Wang, Peng Zhou, Hongshing Lai, Yanbo Xing, Nicolas Samson, Jamison McCorrison, Doug White, Yi Jing, Olivier Saurat, Liping Zhou, Kevin A. T. Silverstein, Jean Weissenbach, Bruce A. Roe, Sebastian Proost, Yves Van de Peer, Xiaohong Wang, Jens Warfsmann, Jérôme Gouzy, Fares Z. Najar

Publikováno v: Nature
Nature, 480, 520-524
Nature, Nature Publishing Group, 2011, 480 (7378), pp.520-524. ⟨10.1038/nature10625⟩
Nature 480 (2011)

Chantier qualité GA; International audience; Legumes (Fabaceae or Leguminosae) are unique among cultivated plants for their ability to carry out endosymbiotic nitrogen fixation with rhizobial bacteria, a process that takes place in a specialized str

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d1b9ac4fa4a0b85616643b6fec84f327
http://europepmc.org/articles/PMC3272368

The map-based sequence of the rice genome

Autor: Shu Mei Liu, Hong-Hwa Chen, Kiran Kumar, Aki Iwabuchi, Luke J. Tallon, Yasuyuki Fujii, Yuichi Ito, Jennifer Currie, Douglas Fadrosh, Bruce Weaver, Hisakazu Iwama, Nahoko Fujitsuka, Arvind K. Bharti, Vivek Dalal, Eric Pelletier, Wataru Karasawa, Carol Soderlund, Masako Okamoto, Ajit K. Pal, Lei Zhang, Tomoko Maehara, Anupama Gaur, Tomotaro Nishikawa, Michiko Ikeda, Jingjie Zhu, Meizhong Luo, Yoshiharu Sato, Dibyendu Kumar, Mikiko Honda, Takuya Habara, Jianyu Song, Yuka Takazaki, Alok Singh, Ari Kikuta, Neilay Dedhia, Thomas E. Bureau, Eric Linton Victor Llaca, Nadia Demange, Yoshiaki Nagamura, Koh Ichi Kadowaki, Takanori Shimokawa, Kohei Arita, Patrick Wincker, Saori Hijishita, Kai Ying, Takahito Bito, Tae-Jin Yang, Mayu Yamamoto, Masahiro Yano, Paulo Dejalma Zimmer, Nagendra K. Singh, Atsuko Idonuma, Jia Liu, Anne Ciecko, Friedrich Engler, Shinji Naito, Pei Fang Lee, Hideki Nagasaki, Jianping Guan, Yoko Ichikawa, Sujit Dike, Shu Ouyang, Yuko Nakama, Masao Hamada, Saurabh Raghuvanshi, Ching San Chen, Teh Yuan Chow, Joseph Hsiao, Béatrice Segurens, Hiroaki Sakai, W. Richard McCombie, Nobukazu Namiki, Hiroyuki Kanamori, Mei-Chu Chung, Yiqi Lu, Claude Scarpelli, Kelly Moffat, Yoshino Chiden, Baltazar A. Antonio, Susan R. McCouch, Paramjit Khurana, Amy Bronzino Nelson, Tamara Feldblyum, Hiroshi Mizuno, Masatoshi Masukawa, Yoshihito Niimura, Tomoya Ohta, Joachim Messing, Yukiyo Ito, Lance E. Palmer, Antonio Costa de Oliveira, Nozomi Ono, Ai Ling Hour, Kumiko Tsuji, Qijun Weng, Michael W. Bevan, Guofan Hong, C. Robin Buell, Subodh K. Srivastava, Atul Bhargava, Galina Fuks, Masahiro Sugiura, Akio Miyao, Kristine Jones, John Yu Liou, Ayano Meguro, Aymeric R. De Vazeille, Mika Tsugane, Xiaohui Liu, Rie Fukunaka, Jean Weissenbach, Shu Jen Lin, Jayati Bera, Tomoya Baba, Yao-Cheng Lin, Lori Spiegel, Laurence Cattolico, Irfan Ahmad Ghazi, Shoko Saji, Jianzhong Wu, Danlin Fan, Takashi Gojobori, Rod A. Wing, Harumi Yamagata, Koji Arikawa, Shuliang Yu, Marcel Salanoubat, Yumi Nakamichi, Kristi Collura, Jetty S.S. Ammiraju, Vipin Gupta, Stephen I. Wright, Y. Huang, Qiang Zhao, Yuichi Katayose, Tingting Lu, Stacey E. Iobst, Akhilesh K. Tyagi, A. O'Shaughnessy, Tilak Raj Sharma, Hiroyoshi Aoki, Kazue Ito, Marina Nakashima, Vydianathan Ravi, J. F. Shaw, Takashi Matsumoto, Tamara Tsitrin, Yoshiyuki Mukai, Steve Reidmuller, Steve Young, Kozue Kamiya, Lidia Nascimento, Qi Feng, Shivani Johri, Kazuko Yukawa, Sylvie Samain, Hirohiko Hirochika, Kimiko Yamamoto, Matthew Reardon, Holly Cordum, Mu Kuei Chu, Kim Yul Ho, Victoria Zismann, Jessica Hill, Tomoko Ito, Gregory Wilson, Isamu Ohta, Bahattin Tanyolac, Amitabh Mohanty, Rie Yoshihara, Nikoleta Juretic, Bin Han, Jie Mu, Susan Van Aken, Satomi Hosokawa, Kayo Machita, Shaohua Jin, Odir Antônio Dellagostin, Satoshi Katagiri, Apichart Vanavichit, Takuji Sasaki, Douglas R. Hoen, Richard K. Wilson, Patrick Minx, Larry Overton, Rentao Song, Kimihiro Terasawa, Jang Ho Hahn, Steve Kavchok, Hiroko Yamane, Parul Khurana, Melissa De La Bastide, Gisela Orjeda, Francis Quetier, Katsumi Sakata, Anita Kapur, Hyeran Kim, Grace Pai, Ian Bancroft, Trilochan Mohapatra, Manami Negishi, Ya Ting Chao, Kanako Kurita, Mari Nakamura, Masaki Fujisawa, Maiko Ikeno, Yu Zhang, Miyuki Sakaguchi, Yuko Nagata, Harumi Kobayashi, Kamlesh Batra, Huisun Zhong, Mary Kim, T. Utterback, Shoji Yoshiki, A. Pandit, Chizuko Harada, Benjamin Burr, Jacqueline Jackson, Jitendra P. Khurana, Michie Shibata, Jiming Jiang, Hue Vuong, Chia Hsiung Cheng, Sachie Ito, Zhukuan Cheng, Qiaoping Yuan, Akiko Hayashi, Tatsumi Mizubayashi, Yeisoo Yu, Nathalie Choisne, Shubha Vij, Noriko Kobayashi, Vivekanand Balija, Hong Pang Wu, K. Sureshbabu, Ying Li, Theresa Zutavern, G. Sangsakoo, Kristen Gansberger, Yujun Zhang, Kazunori Waki, Weiwei Jin, R. Preston, Shigenori Ueda, Yilei Liu, Angélique D'Hont, Kwang-Jen Hsiao, Kumiko Sakai, Richard Bruskiewich, Luiz Anderson Teixeira de Mattos, Teri Rambo, Yue-Ie C. Hsing, Mahavir Yadav, Shinichi Yamamoto, Arnaud Couloux, Sally A. Leong, Kishor Gaikwad, Masumi Iijima, Takeshi Itoh, Gaspar Malone, Gladys Keizer, Anupam Dixit

Publikováno v: Nature

Rice, one of the world's most important food plants, has important syntenic relationships with the other cereal species and is a model plant for the grasses. Here we present a map-based, finished quality sequence that covers 95% of the 389 Mb genome,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3787cdeafa30a915daba53d912f1856
https://doi.org/10.1038/nature03895

The DNA sequence and analysis of human chromosome 14

Autor: Roland Heilig, Ralph Eckenberg, Jean-Louis Petit, Núria Fonknechten, Corinne Da Silva, Laurence Cattolico, Michaël Levy, Valérie Barbe, Véronique de Berardinis, Abel Ureta-Vidal, Eric Pelletier, Virginie Vico, Véronique Anthouard, Lee Rowen, Anup Madan, Shizhen Qin, Hui Sun, Hui Du, Kymberlie Pepin, François Artiguenave, Catherine Robert, Corinne Cruaud, Thomas Brüls, Olivier Jaillon, Lucie Friedlander, Gaelle Samson, Philippe Brottier, Susan Cure, Béatrice Ségurens, Franck Anière, Sylvie Samain, Hervé Crespeau, Nissa Abbasi, Nathalie Aiach, Didier Boscus, Rachel Dickhoff, Monica Dors, Ivan Dubois, Cynthia Friedman, Michel Gouyvenoux, Rose James, Anuradha Madan, Barbara Mairey–Estrada, Sophie Mangenot, Nathalie Martins, Manuela Ménard, Sophie Oztas, Amber Ratcliffe, Tristan Shaffer, Barbara Trask, Benoit Vacherie, Chadia Bellemere, Caroline Belser, Marielle Besnard-Gonnet, Delphine Bartol–Mavel, Magali Boutard, Stéphanie Briez-Silla, Stephane Combette, Virginie Dufossé-Laurent, Carolyne Ferron, Christophe Lechaplais, Claudine Louesse, Delphine Muselet, Ghislaine Magdelenat, Emilie Pateau, Emmanuelle Petit, Peggy Sirvain-Trukniewicz, Arnaud Trybou, Nathalie Vega-Czarny, Elodie Bataille, Elodie Bluet, Isabelle Bordelais, Maria Dubois, Corinne Dumont, Thomas Guérin, Sébastien Haffray, Rachid Hammadi, Jacqueline Muanga, Virginie Pellouin, Dominique Robert, Edith Wunderle, Gilbert Gauguet, Alice Roy, Laurent Sainte-Marthe, Jean Verdier, Claude Verdier-Discala, LaDeana Hillier, Lucinda Fulton, John McPherson, Fumihiko Matsuda, Richard Wilson, Claude Scarpelli, Gábor Gyapay, Patrick Wincker, William Saurin, Francis Quétier, Robert Waterston, Leroy Hood, Jean Weissenbach

Publikováno v: Nature. 421:601-607

Chromosome 14 is one of five acrocentric chromosomes in the human genome. These chromosomes are characterized by a heterochromatic short arm that contains essentially ribosomal RNA genes, and a euchromatic long arm in which most, if not all, of the p

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0d820ff4ceb97c145e8557acff982ef2
https://doi.org/10.1038/nature01348