Zobrazeno 1 - 10
of 35
pro vyhledávání: '"Clémence Frioux"'
Autor:
Klara Cerk, Pablo Ugalde‐Salas, Chabname Ghassemi Nedjad, Maxime Lecomte, Coralie Muller, David J. Sherman, Falk Hildebrand, Simon Labarthe, Clémence Frioux
Publikováno v:
Microbial Biotechnology, Vol 17, Iss 1, Pp n/a-n/a (2024)
Abstract Building models is essential for understanding the functions and dynamics of microbial communities. Metabolic models built on genome‐scale metabolic network reconstructions (GENREs) are especially relevant as a means to decipher the comple
Externí odkaz:
https://doaj.org/article/50f787e11284447f9159b7ef7125d638
Publikováno v:
Computational and Structural Biotechnology Journal, Vol 18, Iss , Pp 1722-1734 (2020)
Metagenomic sequencing of complete microbial communities has greatly enhanced our understanding of the taxonomic composition of microbiotas. This has led to breakthrough developments in bioinformatic disciplines such as assembly, gene clustering, met
Externí odkaz:
https://doaj.org/article/0367b76e0e954d0ab4f22246381e2790
Autor:
Elham Karimi, Enora Geslain, Arnaud Belcour, Clémence Frioux, Méziane Aïte, Anne Siegel, Erwan Corre, Simon M. Dittami
Publikováno v:
PeerJ, Vol 9, p e11344 (2021)
Animals, plants, and algae rely on symbiotic microorganisms for their development and functioning. Genome sequencing and genomic analyses of these microorganisms provide opportunities to construct metabolic networks and to analyze the metabolism of t
Externí odkaz:
https://doaj.org/article/131391ba93084d4ab96c29b77b39b92a
Autor:
Arnaud Belcour, Clémence Frioux, Méziane Aite, Anthony Bretaudeau, Falk Hildebrand, Anne Siegel
Publikováno v:
eLife, Vol 9 (2020)
To capture the functional diversity of microbiota, one must identify metabolic functions and species of interest within hundreds or thousands of microorganisms. We present Metage2Metabo (M2M) a resource that meets the need for de novo functional scre
Externí odkaz:
https://doaj.org/article/0c2d8d84b2e348df814b227a72ec66b7
Autor:
Bertille Burgunter-Delamare, Hetty KleinJan, Clémence Frioux, Enora Fremy, Margot Wagner, Erwan Corre, Alicia Le Salver, Cédric Leroux, Catherine Leblanc, Catherine Boyen, Anne Siegel, Simon M. Dittami
Publikováno v:
Frontiers in Marine Science, Vol 7 (2020)
Brown algae are key components of marine ecosystems and live in association with bacteria that are essential for their growth and development. Ectocarpus siliculosus is a genetic and genomic model for brown algae. Here we use this model to start dise
Externí odkaz:
https://doaj.org/article/0813a937b643458cacf98f7b8298c1f4
Autor:
Méziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián N Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V Markov, Alejandro Maass, Anne Siegel
Publikováno v:
PLoS Computational Biology, Vol 14, Iss 5, p e1006146 (2018)
Genome-scale metabolic models have become the tool of choice for the global analysis of microorganism metabolism, and their reconstruction has attained high standards of quality and reliability. Improvements in this area have been accompanied by the
Externí odkaz:
https://doaj.org/article/bf0ce30ad9b54671bcfea4bb0b3d39fc
Autor:
Julie Laniau, Clémence Frioux, Jacques Nicolas, Caroline Baroukh, Maria-Paz Cortes, Jeanne Got, Camille Trottier, Damien Eveillard, Anne Siegel
Publikováno v:
PeerJ, Vol 5, p e3860 (2017)
Background The emergence of functions in biological systems is a long-standing issue that can now be addressed at the cell level with the emergence of high throughput technologies for genome sequencing and phenotyping. The reconstruction of complete
Externí odkaz:
https://doaj.org/article/fbff42c8d41a4adabbae4c0001f5101e
Autor:
Sylvain Prigent, Clémence Frioux, Simon M Dittami, Sven Thiele, Abdelhalim Larhlimi, Guillaume Collet, Fabien Gutknecht, Jeanne Got, Damien Eveillard, Jérémie Bourdon, Frédéric Plewniak, Thierry Tonon, Anne Siegel
Publikováno v:
PLoS Computational Biology, Vol 13, Iss 1, p e1005276 (2017)
Increasing amounts of sequence data are becoming available for a wide range of non-model organisms. Investigating and modelling the metabolic behaviour of those organisms is highly relevant to understand their biology and ecology. As sequences are of
Externí odkaz:
https://doaj.org/article/518f2f7b9e27497bb380d0c30d680027
Autor:
Delphine Nègre, Méziane Aite, Arnaud Belcour, Clémence Frioux, Loraine Brillet-Guéguen, Xi Liu, Philippe Bordron, Olivier Godfroy, Agnieszka P. Lipinska, Catherine Leblanc, Anne Siegel, Simon M. Dittami, Erwan Corre, Gabriel V. Markov
Publikováno v:
Antioxidants, Vol 8, Iss 11, p 564 (2019)
Understanding growth mechanisms in brown algae is a current scientific and economic challenge that can benefit from the modeling of their metabolic networks. The sequencing of the genomes of Saccharina japonica and Cladosiphon okamuranus has provided
Externí odkaz:
https://doaj.org/article/ad597dc6049c4e2ca0fae892a71f23b9
Autor:
Maxime Lecomte, Wenfan Cao, Julie Aubert, David James Sherman, Hélène Falentin, Clémence Frioux, Simon Labarthe
Cheese organoleptic properties result from complex metabolic processes occurring in microbial communities. A deeper understanding of such mechanisms makes it possible to improve both industrial production processes and end-product quality through the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a84e7a4b97d5cac77a1c64cc7c6f7c4e
https://hal.inrae.fr/hal-04088301
https://hal.inrae.fr/hal-04088301
