Zobrazeno 1 - 10
of 29
pro vyhledávání: '"Cindy Lawley"'
Autor:
Cameron Peace, Nahla Bassil, Dorrie Main, Stephen Ficklin, Umesh R Rosyara, Travis Stegmeir, Audrey Sebolt, Barbara Gilmore, Cindy Lawley, Todd C Mockler, Douglas W Bryant, Larry Wilhelm, Amy Iezzoni
Publikováno v:
PLoS ONE, Vol 7, Iss 12, p e48305 (2012)
High-throughput genome scans are important tools for genetic studies and breeding applications. Here, a 6K SNP array for use with the Illumina Infinium® system was developed for diploid sweet cherry (Prunus avium) and allotetraploid sour cherry (P.
Externí odkaz:
https://doaj.org/article/2567298ac32e4564a2cf40e7eb481faf
Autor:
David Chagné, Ross N Crowhurst, Michela Troggio, Mark W Davey, Barbara Gilmore, Cindy Lawley, Stijn Vanderzande, Roger P Hellens, Satish Kumar, Alessandro Cestaro, Riccardo Velasco, Dorrie Main, Jasper D Rees, Amy Iezzoni, Todd Mockler, Larry Wilhelm, Eric Van de Weg, Susan E Gardiner, Nahla Bassil, Cameron Peace
Publikováno v:
PLoS ONE, Vol 7, Iss 2, p e31745 (2012)
As high-throughput genetic marker screening systems are essential for a range of genetics studies and plant breeding applications, the International RosBREED SNP Consortium (IRSC) has utilized the Illumina Infinium® II system to develop a medium- to
Externí odkaz:
https://doaj.org/article/85ab78519b52485c91f2d9580a813322
Autor:
Jérôme Pauquet, Andrew G. Sharpe, Benjamin Laga, Jacqueline Batley, Emmanuelle Dyrszka, Wing Cheung, Joerg Plieske, Benjamin Stich, Christine Sidebottom, Erin E. Higgins, Yogendra Khedikar, Ralf Wieseke, Ruiyuan Li, Martin W. Ganal, Dave Edwards, Isobel A. P. Parkin, Jinling Meng, Federico L. Iniguez-Luy, Stephen Rae, Wayne E. Clarke, Rod J. Snowdon, Cindy Lawley
Publikováno v:
TAG. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik
Theoretical and Applied Genetics
Theoretical and Applied Genetics
A high-density single nucleotide polymorphism (SNP) Illumina Infinium array, containing 52,157 markers, was developed for the allotetraploid Brassica napus. A stringent selection process employing the short probe sequence for each SNP assay was used
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c4ed188e0ea148afed9b52b0e304252c
https://doi.org/10.1007/s00122-016-2746-7
https://doi.org/10.1007/s00122-016-2746-7
Autor:
Philipp E. Bayer, Armin Scheben, Jacqueline Batley, Brent Verpaalen, Chon-Kit Kenneth Chan, David Edwards, Cindy Lawley
Publikováno v:
The Plant journal : for cell and molecular biology. 98(1)
Advances in sequencing technology have led to a rapid rise in the genomic data available for plants, driving new insights into the evolution, domestication and improvement of crops. Single nucleotide polymorphisms (SNPs) are a major component of crop
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b029a73232fd99d68a2a8b6e05b0ef44
https://pubmed.ncbi.nlm.nih.gov/30548723
https://pubmed.ncbi.nlm.nih.gov/30548723
Autor:
Gil Ben-Zvi, Aparna Natarajan, Karine A. Martinez-Viaud, Cindy Lawley, Kobi Baruch, Judy St. Leger, Jennie Le, Marlem Rivera, Marbie Guillergan, Erich Jaeger, Tammy Biniashvili, Milmer Martinez Vergara, Aleksey V. Zimin, Brian Steffy
Publikováno v:
GigaScience
High quality genomes are essential to resolve challenges in breeding, comparative biology, medicine and conservation planning. New library preparation techniques along with better assembly algorithms result in continued improvements in assemblies for
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::709174b230b7f994248b7b36abdf52fa
https://doi.org/10.1101/376301
https://doi.org/10.1101/376301
Autor:
Archana Bhardwaj, Jesse Poland, David M. Stelly, Alan E. Pepper, Allen Van Deynze, Cindy Lawley, Krishan Mohan Rai, Andrew Spriggs, David B. Harker, Michael A. Gore, Don C. Jones, Michel Claverie, Martin W. Ganal, Fei Wang, Hamid Ashrafi, David D. Fang, Qian-Hao Zhu, Sumit K. Bag, Penny K. Riggs, Sunil Kumar Singh, Joshua A. Udall, Robert L. Byers, Joerg Plieske, Samir V. Sawant, Lori L. Hinze, Iain W. Wilson, Jean-Marc Lacape, Johnie N. Jenkins, Jana Lemm, Steve Hague, Amanda M. Hulse-Kemp, Jodi A. Scheffler, Marc Giband, John J. Burke, Kelli J. Kochan, Ramesh Buyyarapu, James Frelichowski, Mauricio Ulloa, Danny J. Llewellyn, Shirley S Wang, Jen Taylor, S. Islam, Richard G. Percy, Scott Yourstone, Xiuting Zheng
Publikováno v:
G3: Genes|Genomes|Genetics
G3-Genes Genomes Genetics
G3-Genes Genomes Genetics
High-throughput genotyping arrays provide a standardized resource for plant breeding communities that are useful for a breadth of applications including high-density genetic mapping, genome-wide association studies (GWAS), genomic selection (GS), com
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7f24f1eecfe388cf77802105d666ed47
http://europepmc.org/articles/PMC4478548
http://europepmc.org/articles/PMC4478548
Autor:
Mark Hansen, Gonçalo R. Abecasis, Zhaohui S. Qin, Jingjing Gao, Dave Bullis, Antoine Lizee, Rasika A. Mathias, Terri H. Beaty, Henry Richard Johnston, Kathleen C. Barnes, Eimear E. Kenny, Timothy D. O’Connor, Rob Genuario, Cindy Lawley, Pierre-Antoine Gourraud, Christopher R. Gignoux, Carlos Bustamante, Genevieve L. Wojcik, Yi-Juan Hu
Publikováno v:
Scientific Reports
A primary goal of The C onsortium on A sthma among A frican-ancestry P opulations in the A mericas (CAAPA) is to develop an ‘African Diaspora Power Chip’ (ADPC), a genotyping array consisting of tagging SNPs, useful in comprehensively identifying
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6011b1efe392316168bb332eaaad3e14
Autor:
Francis Kusi, Christian Fatokun, Ibrahim Atokple, Steve Wanamaker, Hind Alhakami, Ming-Cheng Luo, Hamid Mirebrahim, Cindy Lawley, Mitchell R. Lucas, Frank M. You, Matthew Alpert, Ousmane Boukar, Jeffrey D. Ehlers, Jiajie Wu, María Muñoz-Amatriaín, Scott A. Jackson, Timothy J. Close, Yi-Ning Guo, Bao-Lam Huynh, Pei Xu, Noelle A. Barkley, Andrew Farmer, Stefano Lonardi, Ndiaga Cisse, Yong Q. Gu, Serdar Bozdag, Benoit Joseph Batieno, Philip A. Roberts, Yaqin Ma, Michael P. Timko, Issa Drabo
Publikováno v:
The Plant journal : for cell and molecular biology, vol 89, iss 5
Summary Cowpea (Vigna unguiculata L. Walp.) is a legume crop that is resilient to hot and drought-prone climates, and a primary source of protein in sub-Saharan Africa and other parts of the developing world. However, genome resources for cowpea have
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b4910102ba733e51e349c6a5cea8a6a4
https://escholarship.org/uc/item/7xs0x18j
https://escholarship.org/uc/item/7xs0x18j
Autor:
Jinling Meng, Jacqueline Batley, Bin Yi, Alice Hayward, Dhwani A. Patel, Salman Alamery, Michal T. Lorenc, Harsh Raman, David Edwards, Cindy Lawley, Yan Long, Reece Tollenaere, Jessica Dalton-Morgan, Rosy Raman, Annaliese S. Mason, Emma Campbell
Publikováno v:
Functional & Integrative Genomics. 14:643-655
Single-nucleotide polymorphisms (SNPs)are molecular markers based on nucleotide variation and can be used for genotyping assays across populations and to track genomic inheritance. SNPs offer a comprehensive genotyping alternative to whole-genome seq
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4cdb308b5dae19ee1d7333d10fc9c320
https://doi.org/10.1007/s10142-014-0391-2
https://doi.org/10.1007/s10142-014-0391-2
Autor:
Debbie Wong, Abraham B. Korol, Eduard Akhunov, Catherine Feuillet, Gina Brown-Guedira, Ivan Mikoulitch, Jan Dvorak, Martin W. Ganal, Marco Maccaferri, Curtis J. Pozniak, Luigi Cattivelli, Joerg Plieske, Rudi Appels, Rudy Dolferus, Anna M. Mastrangelo, Ming-Cheng Luo, Bevan Emma Huang, Alexandra M. Allen, Jorge Dubcovsky, Matthew K. Morell, Michele Morgante, Cindy Lawley, Shichen Wang, Morten Lillemo, Sara Giulia Milner, Shiaoman Chao, Alex Whan, Alina Akhunova, Kerrie Forrest, Matthew J. Hayden, Gary L A Barker, Keith J. Edwards, Jérôme Salse, Stuart Stephen, Roberto Tuberosa, Colin Cavanagh, Silvio Salvi, Ralf Wieseke, Diane E. Mather
Publikováno v:
Plant Biotechnology Journal, vol 12, iss 6
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/3rv2p5j3
Plant Biotechnology Journal
Plant Biotechnology Journal, Wiley, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal, 12(6), 787-796. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/23b137fg
Plant Biotechnology Journal, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/3rv2p5j3
Plant Biotechnology Journal
Plant Biotechnology Journal, Wiley, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩
Wang, S; Wong, D; Forrest, K; Allen, A; Chao, S; Huang, BE; et al.(2014). Characterization of polyploid wheat genomic diversity using a high-density 90 000 single nucleotide polymorphism array. Plant Biotechnology Journal, 12(6), 787-796. doi: 10.1111/pbi.12183. UC Davis: Retrieved from: http://www.escholarship.org/uc/item/23b137fg
Plant Biotechnology Journal, 2014, 12 (6), pp.787-796. ⟨10.1111/pbi.12183⟩
High-density single nucleotide polymorphism (SNP) genotyping arrays are a powerful tool for studying genomic patterns of diversity, inferring ancestral relationships between individuals in populations and studying marker-trait associations in mapping
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9f71b9a9a6976cc20cfe91409c4e0c22
https://doi.org/10.1111/pbi.12183
https://doi.org/10.1111/pbi.12183