Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Christopher I. Hunter"'
Publikováno v:
GigaScience. 11
The increasingly multidisciplinary nature of scientific research necessitates a need for Open Data repositories that can archive data in support of publications in scientific journals. Recognising this need, even before GigaScience launched in 2012,
Autor:
Granger G. Sutton, Bonnie L. Hurwitz, Folker Meyer, Robert D. Finn, Neil M Davies, Scott Tighe, Lynn M. Schriml, Emiley A. Eloe-Fadrosh, Ramona Walls, Christopher I. Hunter, Ilene Karsch Mizrachi, Nikos C. Kyrpides, Maria Chuvochina, Philip Hugenholtz, Susanna-Assunta Sansone
Publikováno v:
Scientific data, vol 7, iss 1
Scientific Data
Scientific Data, Vol 7, Iss 1, Pp 1-4 (2020)
Scientific Data
Scientific Data, Vol 7, Iss 1, Pp 1-4 (2020)
Efficient response to the pandemic through the mobilization of the larger scientific community is challenged by the limited reusability of the available primary genomic data. Here, the Genomic Standards Consortium board highlights the essential need
Autor:
Si Zhe Xiao, Nicole A. Nogoy, Laurie Goodman, Christopher I. Hunter, Robert L. Davidson, Peter Li, Scott C. Edmunds
Publikováno v:
International Journal on Digital Libraries. 18:99-111
In the era of computation and data-driven research, traditional methods of disseminating research are no longer fit-for-purpose. New approaches for disseminating data, methods and results are required to maximize knowledge discovery. The "long tail"
Autor:
Mary Ann Tuli, Peter Li, Chris Armit, Laurie Goodman, Si Zhe Xiao, Christopher I. Hunter, Scott C. Edmunds
Publikováno v:
Database: The Journal of Biological Databases and Curation
With a large increase in the volume and type of data archived in GigaScience Database (GigaDB) since its launch in 2011, we have studied the metrics and user patterns to assess the important aspects needed to best suit current and future use. This ha
Autor:
Sheila Plaister, Marc Rossello, Dimitriy Smirnov, Petra ten Hoopen, Neil Goodgame, Daniel Vaughan, Stéphane Rivière, Nima Pakseresht, Rajesh Radhakrishnan, Rasko Leinonen, Clara Amid, Iain Cleland, Nadeem Faruque, Kethi Reddy, Robert Vaughan, Lawrence Bower, Alexander Senf, Xin Liu, Richard Gibson, Christopher I. Hunter, Guy Cochrane, Vadim Zalunin, Ana Cerdeño-Tárraga, Mikyung Jang, Arnaud Oisel, Ying Cheng, Ewan Birney
Publikováno v:
Nucleic Acids Research
The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena), Europe's primary nucleotide sequence resource, captures and presents globally comprehensive nucleic acid sequence and associated information. Covering the spectrum from raw data to asse
Autor:
Jed A. Fuhrman, Justin Kuczynski, Dawn Field, Renzo Kottmann, Jack A. Gilbert, Dan Knights, Lynn M. Schriml, Patrick D. Schloss, Linda A. Amaral-Zettler, Jeroen Raes, Ruth E. Ley, Mark J. Bailey, Jacques Ravel, Andreas Wilke, David A. Relman, Martin J. Blaser, Wolfgang Ludwig, Lindsay K. Newbold, Rob Knight, Josh D. Neufeld, Frederic D. Bushman, Pier Luigi Buttigieg, Peer Bork, Scott T. Kelley, Michelle I. Smith, Norman Morrison, Christopher I. Hunter, Rohini Sinha, Omry Koren, Catherine A. Lozupone, Christian L. Lauber, Diana R. Nemergut, Tanya Yatsunenko, George M. Weinstock, Patrick S. G. Chain, Sara Nakielny, Elizabeth K. Costello, Timothy F. Booth, Anjanette Johnston, Brian D. Muegge, Sarah K. Highlander, Christian Quast, Susanna Assunta-Sansone, Aymé Spor, Bruce W. Birren, Sujeevan Ratnasingham, Peter Sterk, Andrew S. Whiteley, Antonio Gonzalez, Owen White, Robert P. Guralnick, Pelin Yilmaz, Jeffrey I. Gordon, Emily S. Charlson, Doug Wendel, Dirk Gevers, Eamonn Maguire, Erica Sodergren, Ilene Karsch-Mizrachi, Joseph F. Petrosino, Elmar Pruesse, Folker Meyer, Andrew L. Kau, Jörg Peplies, Giriprakash Palanisamy, Richard A. Gibbs, Jerry Kennedy, Doyle V. Ward, Nikos C. Kyrpides, Karen E. Nelson, Wolfgang Hankeln, Manimozhiyan Arumugam, Philippe Rocca-Serra, Philip Hugenholtz, James M. Tiedje, Robert Larsen, Jesse Stombaugh, Rachel E. Gallery, Lita M. Proctor, Janet K. Jansson, Todd Z. DeSantis, Vivien Bonazzi, Anna Oliver, Laura K. Baumgartner, Robert Vaughan, James R. Cole, Joonhong Park, Frank Oliver Glöckner, Donna Lyons, Heather Huot-Creasy, Teresa M. Legg, Norman R. Pace, Noah Fierer, Jennifer R. Wortman, Barbara A. Methé, Inigo San Gil, Guy Cochrane, Peter Dawyndt
Publikováno v:
Nature Biotechnology. 29:415-420
Here we present a standard developed by the Genomic Standards Consortium (GSC) for reporting marker gene sequences--the minimum information about a marker gene sequence (MIMARKS). We also introduce a system for describing the environment from which a
Autor:
Rajesh Radhakrishnan, Daniel R. Zerbino, Rasko Leinonen, Matthew Corbett, Richard Gibson, Christopher I. Hunter, Robert Vaughan, Siamak Sobhany, Vadim Zalunin, Franck Valentin, Neil Goodgame, Sheila Plaister, Petra ten Hoopen, Hamish McWilliam, Gemma Hoad, Ewan Birney, Lawrence Bower, Michael Maguire, Quan Lin, Mikyung Jang, Ruth Akhtar, Rodrigo Lopez, Steven Leonard, Guy Slater, Ying Cheng, Guy Cochrane, Nadeem Faruque, Fehmi Demiralp, James K. Bonfield
Publikováno v:
Nucleic Acids Research
The European Nucleotide Archive (ENA; http://www.ebi.ac.uk/ena) is Europe’s primary nucleotide sequence archival resource, safeguarding open nucleotide data access, engaging in worldwide collaborative data exchange and integrating with the scientif
Autor:
Gemma Hoad, Ewan Birney, Rajesh Radhakrishnan, Lawrence Bower, Ruth Akhtar, Rodrigo Lopez, James K. Bonfield, Gaurab Mukherjee, Christopher I. Hunter, Rasko Leinonen, Dariusz Lorenc, Vadim Zalunin, Robert Vaughan, Siamak Sobhany, Nadeem Faruque, Mikyung Jang, Stephen J. Robinson, Sheila Plaister, Steven Leonard, Quan Lin, Fehmi Demiralp, Tim Hubbard, Petra ten Hoopen, Szilveszter Juhos, Hamish McWilliam, Richard Gibson, Guy Cochrane
Publikováno v:
Nucleic Acids Research
Dramatic increases in the throughput of nucleotide sequencing machines, and the promise of ever greater performance, have thrust bioinformatics into the era of petabyte-scale data sets. Sequence repositories, which provide the feed for these data set
Autor:
Gillian L. Dalgliesh, Andrew G. Nicholson, Raffaella Smith, Sarah Edkins, Tsun Leung Chan, Adrian Parker, Christopher I. Hunter, Helen Davies, Simon A. Forbes, Michael R. Stratton, Christopher Greenman, Victor E. Velculescu, Claire Stevens, Sarah O’Meara, Marcelo Reis, Peter Goldstraw, Suet Yi Leung, P. Andrew Futreal, Siu Tsan Yuen, Siân Jones, Philip J. Stephens
Publikováno v:
Scopus-Elsevier
ResearcherID
ResearcherID
An activating point mutation in codon 12 of the HRAS gene was the first somatic point mutation identified in a human cancer and established the role of somatic mutations as the common driver of oncogenesis. Since then, there have been over 11,000 mut
Autor:
Laurie Goodman, Xiao Si Zhe, Scott C. Edmunds, Peter Li, Christopher I. Hunter, Tam P. Sneddon
Publikováno v:
Database: The Journal of Biological Databases and Curation
Often papers are published where the underlying data supporting the research are not made available because of the limitations of making such large data sets publicly and permanently accessible. Even if the raw data are deposited in public archives,