Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Christopher, O'Sullivan"'
Autor:
Kenneth S. Katz, Oleg Shutov, Richard Lapoint, Michael Kimelman, J. Rodney Brister, Christopher O’Sullivan
Publikováno v:
Genome Biology, Vol 22, Iss 1, Pp 1-15 (2021)
Abstract Sequence Read Archive submissions to the National Center for Biotechnology Information often lack useful metadata, which limits the utility of these submissions. We describe the Sequence Taxonomic Analysis Tool (STAT), a scalable k-mer-based
Externí odkaz:
https://doaj.org/article/3d96de0f6dbf4ab7a780e060482f635e
Autor:
Oleg Shutov, Michael Kimelman, Richard T. Lapoint, J. Rodney Brister, Kenneth S. Katz, Christopher O'Sullivan
Publikováno v:
Nucleic Acids Res
The Sequence Read Archive (SRA, https://www.ncbi.nlm.nih.gov/sra/) stores raw sequencing data and alignment information to enhance reproducibility and facilitate new discoveries through data analysis. Here we note changes in storage designed to incre
Autor:
J. Rodney Brister, Michael Kimelman, Kenneth S. Katz, Oleg Shutov, Richard T. Lapoint, Christopher O'Sullivan
Publikováno v:
Genome Biology
Genome Biology, Vol 22, Iss 1, Pp 1-15 (2021)
Genome Biology, Vol 22, Iss 1, Pp 1-15 (2021)
Sequence Read Archive submissions to the National Center for Biotechnology Information often lack useful metadata, which limits the utility of these submissions. We describe the Sequence Taxonomic Analysis Tool (STAT), a scalable k-mer-based tool for
Autor:
Derek C Marshall, Susan K Lyman, Scott McCauley, Maria Kovalenko, Rhyannon Spangler, Chian Liu, Michael Lee, Christopher O'Sullivan, Vivian Barry-Hamilton, Haben Ghermazien, Amanda Mikels-Vigdal, Carlos A Garcia, Brett Jorgensen, Arleene C Velayo, Ruth Wang, Joanne I Adamkewicz, Victoria Smith
Publikováno v:
PLoS ONE, Vol 10, Iss 5, p e0127063 (2015)
Expression of matrix metalloproteinase 9 (MMP9) is elevated in a variety of inflammatory and oncology indications, including ulcerative colitis and colorectal cancer. MMP9 is a downstream effector and an upstream mediator of pathways involved in grow
Externí odkaz:
https://doaj.org/article/8613ab116c9b4cdeac17c58cadfebedf
Autor:
Michael Kimelman, J. R. Brister, Oleg Shutov, Richard T. Lapoint, Kenneth S. Katz, Christopher O'Sullivan
Sequence Read Archive submissions to the National Center for Biotechnology Information often lack useful metadata, which limits the utility of these submissions. We describe a scalable k-mer based tool for fast assessment of taxonomic diversity intri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d19205bc0bc4eea9266489463e18aa29
https://doi.org/10.1101/2021.02.16.431451
https://doi.org/10.1101/2021.02.16.431451
Autor:
Mini Balakrishnan, Stephen R Yant, Luong Tsai, Christopher O'Sullivan, Rujuta A Bam, Angela Tsai, Anita Niedziela-Majka, Kirsten M Stray, Roman Sakowicz, Tomas Cihlar
Publikováno v:
PLoS ONE, Vol 8, Iss 9, p e74163 (2013)
HIV-1 integrase (IN) is the target for two classes of antiretrovirals: i) the integrase strand-transfer inhibitors (INSTIs) and ii) the non-catalytic site integrase inhibitors (NCINIs). NCINIs bind at the IN dimer interface and are thought to interfe
Externí odkaz:
https://doaj.org/article/ab7f85858d794836a0e3f22e87f9d8d3
Autor:
Zhi Cao, Christopher O’Sullivan, Juan Tan, Per Kalvig, Luca Ciacci, Weiqiang Chen, Junbeum Kim, Gang Liu
Publikováno v:
Environmental Science & Technology. 56:2839-2839
Publikováno v:
Gothic Studies. 18:74-85
Autor:
Zhi Cao, Per Kalvig, Luca Ciacci, Gang Liu, Juan Tan, Junbeum Kim, Wei-Qiang Chen, Christopher O'Sullivan
Publikováno v:
Environmental Science and Technology
Environmental Science and Technology, 2019, 53 (19), pp.11313-11322. ⟨10.1021/acs.est.9b03765⟩
Cao, Z, O'Sullivan, C, Tan, J, Kalvig, P, Ciacci, L, Chen, W, Kim, J & Liu, G 2019, ' Resourcing the Fairytale Country with Wind Power : A Dynamic Material Flow Analysis ', Environmental Science & Technology, vol. 53, no. 19, pp. 11313-11322 . https://doi.org/10.1021/acs.est.9b03765
Environmental science and technology
Environmental Science and Technology, 2019, 53 (19), pp.11313-11322. ⟨10.1021/acs.est.9b03765⟩
Cao, Z, O'Sullivan, C, Tan, J, Kalvig, P, Ciacci, L, Chen, W, Kim, J & Liu, G 2019, ' Resourcing the Fairytale Country with Wind Power : A Dynamic Material Flow Analysis ', Environmental Science & Technology, vol. 53, no. 19, pp. 11313-11322 . https://doi.org/10.1021/acs.est.9b03765
Environmental science and technology
Wind energy is key to addressing the global climate challenge, but its development is subject to potential constraints of finite primary materials. Prior studies on material demand forecasting of wind power development are often limited to a few mate
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::002176738217c04289a2d194aff8f66c
http://hdl.handle.net/11585/723542
http://hdl.handle.net/11585/723542
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1525
Nucleotide and protein sequences are the foundation for all bioinformatics tools and resources. Researchers can analyze these sequences to discover genes or predict the function of their products. The INSDC (International Nucleotide Sequence Database