Zobrazeno 1 - 10
of 43
pro vyhledávání: '"Christophe Malabat"'
Autor:
Nilmara de Oliveira Alves, Guillaume Dalmasso, Darja Nikitina, Amaury Vaysse, Richard Ruez, Lea Ledoux, Thierry Pedron, Emma Bergsten, Olivier Boulard, Lora Autier, Sofian Allam, Laurence Motreff, Pierre Sauvanet, Diane Letourneur, Pragya Kashyap, Johan Gagnière, Denis Pezet, Catherine Godfraind, Michel Salzet, Emmanuel Lemichez, Mathilde Bonnet, Imène Najjar, Christophe Malabat, Marc Monot, Denis Mestivier, Nicolas Barnich, Pankaj Yadav, Isabelle Fournier, Sean Kennedy, Amel Mettouchi, Richard Bonnet, Iradj Sobhani, Mathias Chamaillard
Publikováno v:
Gut Microbes, Vol 16, Iss 1 (2024)
ABSTRACTIntratumoral bacteria flexibly contribute to cellular and molecular tumor heterogeneity for supporting cancer recurrence through poorly understood mechanisms. Using spatial metabolomic profiling technologies and 16SrRNA sequencing, we herein
Externí odkaz:
https://doaj.org/article/8c88e5e7aa7c4e8590455a2c80f8cc28
Autor:
Stevenn Volant, Pierre Lechat, Perrine Woringer, Laurence Motreff, Pascal Campagne, Christophe Malabat, Sean Kennedy, Amine Ghozlane
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-15 (2020)
Abstract Background Comparing the composition of microbial communities among groups of interest (e.g., patients vs healthy individuals) is a central aspect in microbiome research. It typically involves sequencing, data processing, statistical analysi
Externí odkaz:
https://doaj.org/article/a2a8777a27094f67921552464b51d244
Autor:
Nilmara de Oliveira Alves, Olivier Boulard, Amaury Vaysse, Guillaume Dalmasso, Darja Nikitina, Richard Ruez, Thierry Pedron, Emma Bergstein, Pierre Sauvanet, Diane Letourneur, Catherine Godfraind, Imène Najjar, Emmanuel Lemichez, Juan Lucio Iovanna, Denis Mestivier, Nicolas Barnich, Philippe Sansonetti, Christophe Malabat, Marc Monot, Sean Kennedy, Amel Mettouchi, Richard Bonnet, Iradj Sobhani, Mathias Chamaillard
The cellular heterogeneity within a variety of solid tumors is influenced by several type of tumor-associated bacteria through yet poorly understood mechanisms. Unbiased genomic analysis revealed that right-sided colorectal tumors with poorer prognos
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::873d8a58702524150c7b10f8bb1f84eb
https://doi.org/10.1101/2023.03.13.523827
https://doi.org/10.1101/2023.03.13.523827
Autor:
Laurence Decourty, Antonia Doyen, Christophe Malabat, Emmanuel Frachon, Delphine Rispal, Bertrand Séraphin, Frank Feuerbach, Alain Jacquier, Cosmin Saveanu
Publikováno v:
Cell Reports, Vol 6, Iss 4, Pp 593-598 (2014)
Nonsense-mediated mRNA decay (NMD) destabilizes eukaryotic transcripts with long 3′ UTRs. To investigate whether other transcript features affect NMD, we generated yeast strains expressing chromosomal-derived mRNAs with 979 different promoter and o
Externí odkaz:
https://doaj.org/article/7e77ba57b9334124ad7b0f22e19c7d82
Autor:
Pierre Lechat, Laurence Motreff, Amine Ghozlane, Stevenn Volant, Christophe Malabat, Perrine Woringer, Pascal Campagne, Sean Kennedy
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-15 (2020)
BMC Bioinformatics
BMC Bioinformatics, 2020, 21 (1), pp.345. ⟨10.1186/s12859-020-03666-4⟩
BMC Bioinformatics, BioMed Central, 2020, 21 (1), pp.345. ⟨10.1186/s12859-020-03666-4⟩
BMC Bioinformatics
BMC Bioinformatics, 2020, 21 (1), pp.345. ⟨10.1186/s12859-020-03666-4⟩
BMC Bioinformatics, BioMed Central, 2020, 21 (1), pp.345. ⟨10.1186/s12859-020-03666-4⟩
Background Comparing the composition of microbial communities among groups of interest (e.g., patients vs healthy individuals) is a central aspect in microbiome research. It typically involves sequencing, data processing, statistical analysis and gra
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4490f3bad7ceb345f5e42f820eb087e6
http://link.springer.com/article/10.1186/s12859-020-03666-4
http://link.springer.com/article/10.1186/s12859-020-03666-4
Publikováno v:
eLife, Vol 4 (2015)
Nonsense-mediated mRNA decay (NMD) is a translation-dependent RNA quality-control pathway targeting transcripts such as messenger RNAs harboring premature stop-codons or short upstream open reading frame (uORFs). Our transcription start sites (TSSs)
Externí odkaz:
https://doaj.org/article/4fc0945da5244f8ab28e8f132e2e88d3
Publikováno v:
Nucleic Acids Research
Nucleic Acids Research, Oxford University Press, 2021, pp.8535-8555. ⟨10.1093/nar/gkab680⟩
Nucleic Acids Research, 2021, pp.8535-8555. ⟨10.1093/nar/gkab680⟩
Nucleic Acids Research, Oxford University Press, 2021, pp.8535-8555. ⟨10.1093/nar/gkab680⟩
Nucleic Acids Research, 2021, pp.8535-8555. ⟨10.1093/nar/gkab680⟩
International audience; Abstract Gene deletion and gene expression alteration can lead to growth defects that are amplified or reduced when a second mutation is present in the same cells. We performed 154 genetic interaction mapping (GIM) screens wit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::cc1f28b2fa7d8627b12aa2fd97168446
https://hal.archives-ouvertes.fr/hal-03320796
https://hal.archives-ouvertes.fr/hal-03320796
Gene deletion and gene expression alteration can lead to growth defects that are amplified or reduced when a second mutation is present in the same cells. We performed 154 genetic interaction mapping (GIM) screens with mutants related with RNA metabo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::f083dbc23c88422be3a655c3ce4c17db
https://doi.org/10.1101/2020.10.04.325191
https://doi.org/10.1101/2020.10.04.325191
Autor:
Christophe Malabat, Amine Ghozlane, Pierre Lechat, Stevenn Volant, Sean Kennedy, Perrine Woringer, Laurence Motreff
BackgroundComparing the composition of microbial communities among groups of interest (e.g., patients vs healthy individuals) is a central aspect in microbiome research. It typically involves sequencing, data processing, statistical analysis and grap
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e4b915cde154777d9783c5e496efc0cc
https://doi.org/10.21203/rs.2.23213/v1
https://doi.org/10.21203/rs.2.23213/v1
Autor:
Gérald Peyroche, Cosmin Saveanu, Marc Dauplais, Myriam Lazard, François Beuneu, Laurence Decourty, Christophe Malabat, Alain Jacquier, Sylvain Blanquet, Pierre Plateau
Publikováno v:
PLoS ONE, Vol 7, Iss 5, p e36343 (2012)
Hydrogen selenide is a recurrent metabolite of selenium compounds. However, few experiments studied the direct link between this toxic agent and cell death. To address this question, we first screened a systematic collection of Saccharomyces cerevisi
Externí odkaz:
https://doaj.org/article/e9c6b80a22464d87a2bdee148b2d7bd3