Zobrazeno 1 - 10
of 20
pro vyhledávání: '"Christian D. Haudenschild"'
Autor:
Matthew K. Christenson, Paul H. Davis, Brandi L. Cantarel, Kent S. Shelby, Andrew J. Trease, Blake Bextine, Daniel G. Weaver, Magdalen Lindeberg, Wayne B. Hunter, Justin MacCarthy, Shunsheng Han, Shannon L. Johnson, Steven V. Ready, Justin T. Reese, Courtney McCormick, Hong Huang, Robert G. Shatters, Cecilia Tamborindeguy, Christian D. Haudenschild, Vincent M. Davis, David G. Hall, Nan Leng, Surya Saha
Publikováno v:
Journal of Genomics
The Asian citrus psyllid, Diaphorina citri Kuwayama (Hemiptera: Psyllidae) is a vector for the causative agents of Huanglongbing, which threatens citrus production worldwide. This study reports and discusses the first D. citri transcriptomes, encompa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ef382e4d5ecfd387b1401ef0b5121ce9
https://doi.org/10.7150/jgen.7692
https://doi.org/10.7150/jgen.7692
Autor:
Shuji Takahashi, Yutaka Suzuki, Douglas W. Houston, Christian D. Haudenschild, Tsutomu Kinoshita, Darwin S. Dichmann, Shuuji Mawaribuchi, Masanori Taira, Jane Grimwood, Martin F. Flajnik, Yumi Izutsu, Tatsuo Michiue, Michihiko Ito, Yoko Kuroki, Yuzuru Ito, Yuko Ohta, Oleg Simakov, Ila van Kruijsbergen, Taejoon Kwon, Shengquiang Shu, Jacob O. Kitzman, Edward M. Marcotte, Adam M. Session, Yuuri Yasuoka, Sahar V. Mozaffari, Jonathan C. Stites, Jay Shendure, Minoru Watanabe, Joseph W. Carlson, Rebecca Heald, Nicholas H. Putnam, Akimasa Fukui, John B. Wallingford, Aaron M. Zorn, Kevin A. Burns, Atsushi Suzuki, Sven Heinz, Jarrod Chapman, Therese Mitros, Hajime Ogino, Georgios Georgiou, Makoto Asashima, Kamran Karimi, Uffe Hellsten, Jeremy Schmutz, Daniel S. Rokhsar, Joshua D. Fortriede, Yoshinobu Uno, Vaneet Lotay, Jerry Jenkins, Simon J. van Heeringen, Akira Hikosaka, Toshiaki Tanaka, Atsushi Toyoda, Yoshikazu Haramoto, Sarita S. Paranjpe, Chiyo Takagi, Yoichi Matsuda, Takuya Nakayama, Takamasa S. Yamamoto, Ryan Lister, Asao Fujiyama, Richard M. Harland, Ian K. Quigley, Kelly E. Miller, Louis DuPasquier, Peter D. Vize, Gert Jan C. Veenstra, Mariko Kondo, Ozren Bogdanovic, Haruki Ochi, Jessica B. Lyons, Jacques Robert, Naoto Ueno
Publikováno v:
Nature, vol 538, iss 7625
Nature, 538, 336-362
Nature, 538, pp. 336-362
Nature, 538, 336-362
Nature, 538, pp. 336-362
To explore the origins and consequences of tetraploidy in the African clawed frog, we sequenced the Xenopus laevis genome and compared it to the related diploid X. tropicalis genome. We characterize the allotetraploid origin of X. laevis by partition
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::bb634b9e56d258b46c4fef0a637602ed
https://escholarship.org/uc/item/8h02q9hf
https://escholarship.org/uc/item/8h02q9hf
Autor:
Donal T. Manahan, Christian D. Haudenschild, Shannon Decola, Dennis Hedgecock, Ben Bowen, Eli Meyer, Jing-Zhong Lin
Publikováno v:
Proceedings of the National Academy of Sciences. 104:2313-2318
Compared with understanding of biological shape and form, knowledge is sparse regarding what regulates growth and body size of a species. For example, the genetic and physiological causes of heterosis (hybrid vigor) have remained elusive for nearly a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::429ccd57a247e060e0bc702311d9cb4b
https://doi.org/10.1073/pnas.0610880104
https://doi.org/10.1073/pnas.0610880104
Autor:
Irina Khrebtukova, C. Victor Jongeneel, Mauro Delorenzi, Andrew J. G. Simpson, Robert L. Strausberg, Thomas J. Vasicek, Daixing Zhou, Christian Iseli, Christian D. Haudenschild, Brian Stevenson, Dmitry Kuznetsov
Publikováno v:
Genome Research. 15:1007-1014
We have used massively parallel signature sequencing (MPSS) to sample the transcriptomes of 32 normal human tissues to an unprecedented depth, thus documenting the patterns of expression of almost 20,000 genes with high sensitivity and specificity. T
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::15782c67302137a11ff7df1c2bcd6504
https://doi.org/10.1101/gr.4041005
https://doi.org/10.1101/gr.4041005
Autor:
Christian D. Haudenschild, Tam H. Vu, Shannon Decola, Steve B. Edberg, Shivakundan Singh Tej, Hassan Ghazal, Blake C. Meyers, Vikas Agrawal
Publikováno v:
Genome Research. 14:1641-1653
We have generated 36,991,173 17-base sequence “signatures” representing transcripts from the model plant Arabidopsis. These data were derived by massively parallel signature sequencing (MPSS) from 14 libraries and comprised 268,132 distinct seque
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::191534efba60e8d46e7a180c9b41d4df
https://doi.org/10.1101/gr.2275604
https://doi.org/10.1101/gr.2275604
Autor:
Christian D. Haudenschild, Blake C. Meyers, Jianchang Ning, Marta Matvienko, Shivakundan Singh Tej, Hassan Ghazal, Vikas Agrawal, Tam H. Vu
Publikováno v:
Nature Biotechnology. 22:1006-1011
Large-scale sequencing of short mRNA-derived tags can establish the qualitative and quantitative characteristics of a complex transcriptome. We sequenced 12,304,362 tags from five diverse libraries of Arabidopsis thaliana using massively parallel sig
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::672db42484b66dfa2183bdc81a391399
https://doi.org/10.1038/nbt992
https://doi.org/10.1038/nbt992
Autor:
Xiaowei Zhu, Kenneth B. Beckman, Myrna M. Weissman, Alexander E. Urban, Stephen B. Montgomery, Christian D. Haudenschild, Sara Mostafavi, Courtney McCormick, Jianxin Shi, Alexis Battle, James B. Potash, Rui Mei, Douglas F. Levinson, Daphne Koller
Understanding the consequences of regulatory variation in the human genome remains a major challenge, with important implications for understanding gene regulation and interpreting the many disease-risk variants that fall outside of protein-coding re
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f93c46a83a1b39c1036058c89b8fe179
https://europepmc.org/articles/PMC3875855/
https://europepmc.org/articles/PMC3875855/
Publikováno v:
Archives of Biochemistry and Biophysics. 379:127-136
The oxygenation pattern of the essential oil monoterpenes of commercial mint (Mentha) species is determined by regiospecific cytochrome P450-catalyzed hydroxylation of the common olefinic precursor (-)-4S-limonene. In spearmint (M. spicata), C6-allyl
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::697b4c2408fb86baf9cc235517e74e52
https://doi.org/10.1006/abbi.2000.1864
https://doi.org/10.1006/abbi.2000.1864
Autor:
Christian D. Haudenschild, Leeson J. Alexander, John W. Keele, Curtis P. Van Tassell, Susan M. Bridges, Steven G. Schroeder, Cathy R. Gresham, Timothy P. L. Smith, Tad S. Sonstegard, Lakshmi K. Matukumalli, Shane C. Burgess, Gregory P. Harhay
Publikováno v:
Genome Biology
Background A comprehensive transcriptome survey, or gene atlas, provides information essential for a complete understanding of the genomic biology of an organism. We present an atlas of RNA abundance for 92 adult, juvenile and fetal cattle tissues an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d69d737e928179f4ef9b893404d7b08d
https://pubmed.ncbi.nlm.nih.gov/20961407
https://pubmed.ncbi.nlm.nih.gov/20961407
Autor:
Thomas Royce, Paula Kokko-Gonzales, Lina Chen, Gonzalo R. Ordóñez, Philip J. Stephens, Ole Schulz-Trieglaff, Ignacio Varela, Michael R. Stratton, Peter J. Campbell, Meng-Lay Lin, Lynda Chin, R. Keira Cheetham, Sarah Edkins, P. Andrew Futreal, Matthew M. Hims, Richard J. Carter, Markus J. Bauer, Christian D. Haudenschild, Catherine Leroy, Lukasz Szajkowski, Erin Pleasance, Adam Butler, Jon W. Teague, Zoya Kingsbury, David J. McBride, Christopher Greenman, Lucy Stebbings, Julie Alipaz, Terena James, John Marshall, Laura Mudie, Sean Humphray, Mingming Jia, David Beare, Kai Ye, Andrew Menzies, David Williamson, Russell J. Grocock, Graham R. Bignell, Anastassia Spiridou, Niall Anthony Gormley, Zemin Ning, Anthony J. Cox, David R. Bentley, Mark T. Ross
Publikováno v:
Nature, 463(7278), 191
All cancers carry somatic mutations. A subset of these somatic alterations, termed driver mutations, confer selective growth advantage and are implicated in cancer development, whereas the remainder are passengers. Here we have sequenced the genomes
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d8eab9724070b463b05c94e44897333e
https://hdl.handle.net/1887/108464
https://hdl.handle.net/1887/108464