Zobrazeno 1 - 10
of 65
pro vyhledávání: '"Choi Kiri"'
Living systems continually respond to signals from the surrounding environment. Survival requires that their responses adapt quickly and robustly to the changes in the environment. One particularly challenging example is olfactory navigation in turbu
Externí odkaz:
http://arxiv.org/abs/2405.20135
Autor:
Madsen Curtis, Goñi Moreno Angel, P Umesh, Palchick Zachary, Roehner Nicholas, Atallah Christian, Bartley Bryan, Choi Kiri, Cox Robert Sidney, Gorochowski Thomas, Grünberg Raik, Macklin Chris, McLaughlin James, Meng Xianwei, Nguyen Tramy, Pocock Matthew, Samineni Meher, Scott-Brown James, Tarter Ysis, Zhang Michael, Zhang Zhen, Zundel Zach, Beal Jacob, Bissell Michael, Clancy Kevin, Gennari John H., Misirli Goksel, Myers Chris, Oberortner Ernst, Sauro Herbert, Wipat Anil
Publikováno v:
Journal of Integrative Bioinformatics, Vol 16, Iss 2 (2019)
Synthetic biology builds upon the techniques and successes of genetics, molecular biology, and metabolic engineering by applying engineering principles to the design of biological systems. The field still faces substantial challenges, including long
Externí odkaz:
https://doaj.org/article/d6c6e56ec2e94b8aa1847a07c537a2c4
This work presents a general chemical reaction network theory for olfactory sensing processes that employ G-protein-coupled receptors as olfactory receptors (ORs). The theory is applicable to general mixtures of odorants and an arbitrary number of OR
Externí odkaz:
http://arxiv.org/abs/2308.11936
Autor:
Beal Jacob, Cox Robert Sidney, Grünberg Raik, McLaughlin James, Nguyen Tramy, Bartley Bryan, Bissell Michael, Choi Kiri, Clancy Kevin, Macklin Chris, Madsen Curtis, Misirli Goksel, Oberortner Ernst, Pocock Matthew, Roehner Nicholas, Samineni Meher, Zhang Michael, Zhang Zhen, Zundel Zach, Gennari John H., Myers Chris, Sauro Herbert, Wipat Anil
Publikováno v:
Journal of Integrative Bioinformatics, Vol 13, Iss 3, Pp 30-132 (2016)
Synthetic biology builds upon the techniques and successes of genetics, molecular biology, and metabolic engineering by applying engineering principles to the design of biological systems. The field still faces substantial challenges, including long
Externí odkaz:
https://doaj.org/article/96cc246178c04339b1e4ab26e388cc9a
Autor:
Cox Robert Sidney, Madsen Curtis, McLaughlin James Alastair, Nguyen Tramy, Roehner Nicholas, Bartley Bryan, Beal Jacob, Bissell Michael, Choi Kiri, Clancy Kevin, Grünberg Raik, Macklin Chris, Misirli Goksel, Oberortner Ernst, Pocock Matthew, Samineni Meher, Zhang Michael, Zhang Zhen, Zundel Zach, Gennari John H., Myers Chris, Sauro Herbert, Wipat Anil
Publikováno v:
Journal of Integrative Bioinformatics, Vol 15, Iss 1 (2018)
Synthetic biology builds upon the techniques and successes of genetics, molecular biology, and metabolic engineering by applying engineering principles to the design of biological systems. The field still faces substantial challenges, including long
Externí odkaz:
https://doaj.org/article/7eae06626bfd4c8bbac1781f827e1a85
BioSimulators: a central registry of simulation engines and services for recommending specific tools
Autor:
Shaikh, Bilal, Smith, Lucian P., Vasilescu, Dan, Marupilla, Gnaneswara, Wilson, Michael, Agmon, Eran, Agnew, Henry, Andrews, Steven S., Anwar, Azraf, Beber, Moritz E., Bergmann, Frank T., Brooks, David, Brusch, Lutz, Calzone, Laurence, Choi, Kiri, Cooper, Joshua, Detloff, John, Drawert, Brian, Dumontier, Michel, Ermentrout, G. Bard, Faeder, James R., Freiburger, Andrew P., Fröhlich, Fabian, Funahashi, Akira, Garny, Alan, Gennari, John H., Gleeson, Padraig, Goelzer, Anne, Haiman, Zachary, Hellerstein, Joseph L., Hoops, Stefan, Ison, Jon C., Jahn, Diego, Jakubowski, Henry V., Jordan, Ryann, Kalaš, Matúš, König, Matthias, Liebermeister, Wolfram, Mandal, Synchon, McDougal, Robert, Medley, J. Kyle, Mendes, Pedro, Müller, Robert, Myers, Chris J., Naldi, Aurelien, Nguyen, Tung V. N., Nickerson, David P., Olivier, Brett G., Patoliya, Drashti, Paulevé, Loïc, Petzold, Linda R., Priya, Ankita, Rampadarath, Anand K., Rohwer, Johann M., Saglam, Ali S., Singh, Dilawar, Sinha, Ankur, Snoep, Jacky, Sorby, Hugh, Spangler, Ryan, Starruß, Jörn, Thomas, Payton J., van Niekerk, David, Weindl, Daniel, Zhang, Fengkai, Zhukova, Anna, Goldberg, Arthur P., Blinov, Michael L., Sauro, Herbert M., Moraru, Ion I., Karr, Jonathan R.
Computational models have great potential to accelerate bioscience, bioengineering, and medicine. However, it remains challenging to reproduce and reuse simulations, in part, because the numerous formats and methods for simulating various subsystems
Externí odkaz:
http://arxiv.org/abs/2203.06732
Motivation: This paper presents libRoadRunner 2.0, an extensible, high-performance, cross-platform, open-source software library for the simulation and analysis of models expressed using Systems Biology Markup Language SBML). Results: libRoadRunner i
Externí odkaz:
http://arxiv.org/abs/2203.01175
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