Zobrazeno 1 - 10
of 3 319
pro vyhledávání: '"Cheung, A. S."'
Autor:
Johnson, Connah G. M., Johnson, Zachary, Mackey, Liam S., Li, Xiaolu, Sadler, Natalie C., Zhang, Tong, Qian, Wei-Jun, Bohutskyi, Pavlo, Feng, Song, Cheung, Margaret S.
We develop a systems approach based on an energy-landscape concept to differentiate interactions involving redox activities and conformational changes of proteins and nucleic acids interactions in multi-layered protein-DNA regulatory networks under l
Externí odkaz:
http://arxiv.org/abs/2410.09346
Autor:
Zhang, Pengzhi, Nde, Jules, Eliaz, Yossi, Jennings, Nathaniel, Cieplak, Piotr, Cheung, Margaret. S.
Proteins' fuzziness are features for communicating changes in cell signaling instigated by binding with secondary messengers, such as calcium ions, associated with the coordination of muscle contraction, neurotransmitter release, and gene expression.
Externí odkaz:
http://arxiv.org/abs/2407.17017
Autor:
Amaro, Rommie, Åqvist, Johan, Bahar, Ivet, Battistini, Federica, Bellaiche, Adam, Beltran, Daniel, Biggin, Philip C., Bonomi, Massimiliano, Bowman, Gregory R., Bryce, Richard, Bussi, Giovanni, Carloni, Paolo, Case, David, Cavalli, Andrea, Chang, Chie-En A., Cheatham III, Thomas E., Cheung, Margaret S., Chipot, Cris, Chong, Lillian T., Choudhary, Preeti, Cisneros, Gerardo Andres, Clementi, Cecilia, Collepardo-Guevara, Rosana, Coveney, Peter, Covino, Roberto, Crawford, T. Daniel, Peraro, Matteo Dal, de Groot, Bert, Delemotte, Lucie, De Vivo, Marco, Essex, Jonathan, Fraternali, Franca, Gao, Jiali, Gelpí, Josep Lluís, Gervasio, Francesco Luigi, Gonzalez-Nilo, Fernando Danilo, Grubmüller, Helmut, Guenza, Marina, Guzman, Horacio V., Harris, Sarah, Head-Gordon, Teresa, Hernandez, Rigoberto, Hospital, Adam, Huang, Niu, Huang, Xuhui, Hummer, Gerhard, Iglesias-Fernández, Javier, Jensen, Jan H., Jha, Shantenu, Jiao, Wanting, Jorgensen, William L., Kamerlin, Shina Caroline Lynn, Khalid, Syma, Laughton, Charles, Levitt, Michael, Limongelli, Vittorio, Lindahl, Erik, Lindorff-Larsen, Kresten, Loverde, Sharon, Lundborg, Magnus, Luo, Yun Lyna, Luque, Francisco Javier, Lynch, Charlotte I., MacKerell, Alexander, Magistrato, Alessandra, Marrink, Siewert J., Martin, Hugh, McCammon, J. Andrew, Merz, Kenneth, Moliner, Vicent, Mulholland, Adrian, Murad, Sohail, Naganathan, Athi N., Nangia, Shikha, Noe, Frank, Noy, Agnes, Oláh, Julianna, O'Mara, Megan, Ondrechen, Mary Jo, Onuchic, José N., Onufriev, Alexey, Osuna, Silvia, Panchenko, Anna R., Pantano, Sergio, Parish, Carol, Parrinello, Michele, Perez, Alberto, Perez-Acle, Tomas, Perilla, Juan R., Pettitt, B. Montgomery, Pietropalo, Adriana, Piquemal, Jean-Philip, Poma, Adolfo, Praprotnik, Matej, Ramos, Maria J., Ren, Pengyu, Reuter, Nathalie, Roitberg, Adrian, Rosta, Edina, Rovira, Carme, Roux, Benoit, Röthlisberger, Ursula, Sanbonmatsu, Karissa Y., Schlick, Tamar, Shaytan, Alexey K., Simmerling, Carlos, Smith, Jeremy C., Sugita, Yuji, Świderek, Katarzyna, Taiji, Makoto, Tao, Peng, Tikhonova, Irina G., Tirado-Rives, Julian, Tunón, Inaki, Van Der Kamp, Marc W., Van der Spoel, David, Velankar, Sameer, Voth, Gregory A., Wade, Rebecca, Warshel, Ariel, Welborn, Valerie Vaissier, Wetmore, Stacey, Wong, Chung F., Yang, Lee-Wei, Zacharias, Martin, Orozco, Modesto
This letter illustrates the opinion of the molecular dynamics (MD) community on the need to adopt a new FAIR paradigm for the use of molecular simulations. It highlights the necessity of a collaborative effort to create, establish, and sustain a data
Externí odkaz:
http://arxiv.org/abs/2407.16584
Autor:
Nazari, P., Cheung, J. S. Y., Asensio, J. Ferrer, Murillo, N. M., van Dishoeck, E. F., Jørgensen, J. K., Bourke, T. L., Chuang, K. -J., Drozdovskaya, M. N., Fedoseev, G., Garrod, R. T., Ioppolo, S., Linnartz, H., McGuire, B. A., Müller, H. S. P., Qasim, D., Wampfler, S. F.
Publikováno v:
A&A 686, A59 (2024)
Complex organic molecules (COMs) have been detected ubiquitously in protostellar systems. However, at shorter wavelengths (~0.8mm) it is more difficult to detect larger molecules than at longer wavelengths (~3mm) because of the increase of millimeter
Externí odkaz:
http://arxiv.org/abs/2401.04760
Autor:
Li, Xiangyu, Yin, Xiaolong, Wiebe, Nathan, Chun, Jaehun, Schenter, Gregory K., Cheung, Margaret S., Mülmenstädt, Johannes
Numerical simulation of turbulent fluid dynamics needs to either parameterize turbulence-which introduces large uncertainties-or explicitly resolve the smallest scales-which is prohibitively expensive. Here we provide evidence through analytic bounds
Externí odkaz:
http://arxiv.org/abs/2303.16550
Autor:
George, August, Kim, Doo Nam, Moser, Trevor, Gildea, Ian T., Evans, James E., Cheung, Margaret S.
In this study, we present a method of pattern mining based on network theory that enables the identification of protein structures or complexes from synthetic volume densities, without the knowledge of predefined templates or human biases for refinem
Externí odkaz:
http://arxiv.org/abs/2210.08194
Publikováno v:
In Thinking Skills and Creativity September 2024 53
Autor:
Cheung, Moira S., Alves, Inês, Carl-Innig, Patricia, Eastwood, Deborah, Maghnie, Mohamad, Offiah, Amaka, Paley, Dror, Riganti, Simone, Savarirayan, Ravi, Sessa, Marco, Vogt, Bjoern, Mohnike, Klaus
Publikováno v:
In Bone January 2025 190
Autor:
Cheung, Olivia S.1,2 (AUTHOR) olivia.cheung@nyu.edu, Quimpo, Nathan J.1 (AUTHOR), Smoley, James1 (AUTHOR)
Publikováno v:
Scientific Reports. 7/11/2024, Vol. 14 Issue 1, p1-14. 14p.
We explored the dynamical and structural effects of actin-related proteins 2/3 (Arp2/3) on actomyosin networks using mechanochemical simulations of active matter networks. At a nanoscale, the Arp2/3 complex alters the topology of actomyosin by nuclea
Externí odkaz:
http://arxiv.org/abs/2106.04005