Zobrazeno 1 - 10
of 114
pro vyhledávání: '"Charles G. Kurland"'
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Biochimie. 138:137-155
A reliable phylogenetic reconstruction of the evolutionary history of contemporary species depends on a robust identification of the universal common ancestor (UCA) at the root of the Tree of Life (ToL). That root polarizes the tree so that the evolu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb3815e52d1ee4ea7608f160d49cc01d
https://doi.org/10.1016/j.biochi.2017.04.014
https://doi.org/10.1016/j.biochi.2017.04.014
Publikováno v:
Genome Biology and Evolution
The evolutionary origins of viruses according to marker gene phylogenies, as well as their relationships to the ancestors of host cells remains unclear. In a recent article Nasir and Caetano-Anolles reported that their genome-scale phylogenetic analy
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e0b3e17f02dc5393f0e22cebfb18952
https://doi.org/10.1093/gbe/evw175
https://doi.org/10.1093/gbe/evw175
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Molecular Mechanisms of Microbial Evolution ISBN: 9783319690773
In 1998, on the brink of a great public effort that by now has delivered the sequences of thousands of genomes and has annotated these genomes by translating tens of thousands of 3D protein domain structures from their coding sequences, Ernst Mayr an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7c3678794b342f6deed6c7897ff63311
https://doi.org/10.1007/978-3-319-69078-0_2
https://doi.org/10.1007/978-3-319-69078-0_2
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Biochimie. 119:205-208
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::814b8d470a57266fb40a0002afdd9f5e
https://doi.org/10.1016/j.biochi.2015.10.023
https://doi.org/10.1016/j.biochi.2015.10.023
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Biochimie. 119:284-302
In this introductory retrospective, evolution as viewed through gene trees is inspected through a lens compounded from its founding operational assumptions. The four assumptions of the gene tree culture that are singularly important to evolutionary i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b0acc8ea4ca99d80b57357e42c8eb53c
https://doi.org/10.1016/j.biochi.2015.07.027
https://doi.org/10.1016/j.biochi.2015.07.027
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Journal of theoretical biology. 434
Lynn Sagan's conjecture (1967) that three of the fundamental organelles observed in eukaryote cells, specifically mitochondria, plastids and flagella were once free-living primitive (prokaryotic) cells was accepted after considerable opposition. Even
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eeb4103e2bdd8c7e285abba19b102597
https://pubmed.ncbi.nlm.nih.gov/28754286
https://pubmed.ncbi.nlm.nih.gov/28754286
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Biochimie. 138
We reconstructed a global tree of life (ToL) with non-reversible and non-stationary models of genome evolution that root trees intrinsically. We implemented Bayesian model selection tests and compared the statistical support for four conflicting ToL
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::10aa5c918c8a53e2ac45981114cc9c33
https://pubmed.ncbi.nlm.nih.gov/28461155
https://pubmed.ncbi.nlm.nih.gov/28461155
Reply to Caetano-Anollés et al. comment on 'Empirical genome evolution models root the tree of life'
Autor:
Ajith Harish, Charles G. Kurland
Publikováno v:
Biochimie. 149:137-138
We recently analyzed the robustness of competing evolution models developed to identify the root of the Tree of Life: 1) An empirical Sankoff parsimony (ESP) model (Harish and Kurland, 2017), which is a nonstationary and directional evolution model;
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e96b9b1a0a8bd47e41e49dcc70d15494
https://doi.org/10.1016/j.biochi.2018.04.002
https://doi.org/10.1016/j.biochi.2018.04.002
Autor:
Charles G. Kurland
Publikováno v:
BioEssays. 32:866-871
Modern cells present no signs of a putative prebiotic RNA world. However, RNA coding is not a sine qua non for the accumulation of catalytic polypeptides. Thus, cellular proteins spontaneously fold into active structures that are resistant to proteol
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::82b93f3148132e5052c7d836f332d024
https://doi.org/10.1002/bies.201000058
https://doi.org/10.1002/bies.201000058
Publikováno v:
Molecular Microbiology. 75:1078-1089
Genes introduced by gene replacements and other types of horizontal gene transfer (HGT) represent a significant presence in many archaeal and eubacterial genomes. Most alien genes are likely to be neutral or deleterious upon arrival and their long-te
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2036c79cf4feb1677b4f5c4bfa661a4
https://doi.org/10.1111/j.1365-2958.2009.07030.x
https://doi.org/10.1111/j.1365-2958.2009.07030.x