Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Charles E. DeZiel"'
Autor:
Mary Carrington, Bruce D. Walker, Damien Z. Soghoian, Daniel Karel, Carl M. Kadie, Oliver B. Davis, Ariel Goldenthal, Alicja Piechocka, Jian Peng, David Heckerman, Jonathan M. Carlson, Florencia Pereyra, Tien-Ho Lin, Charles E. DeZiel
Publikováno v:
Journal of Virology. 88:12937-12948
We investigated the hypothesis that the correlation between the class I HLA types of an individual and whether that individual spontaneously controls HIV-1 is mediated by the targeting of specific epitopes by CD8 + T cells. By measuring gamma interfe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1bba36e37bcc22ae49246fda40f2a099
https://doi.org/10.1128/jvi.01004-14
https://doi.org/10.1128/jvi.01004-14
Autor:
Simon Mallal, Zabrina L. Brumme, Nico Pfeifer, William Kilembe, Victor Y. Du, Roger L. Shapiro, Nicolo Fusi, Paul A. Goepfert, Mina John, David Heckerman, Jonathan M. Carlson, Todd M. Allen, Matthew Price, Anju Bansal, Eric Hunter, Philip J. R. Goulder, Vincent Y. F. Tan, P. Richard Harrigan, John Frater, Anat Kreimer, Chanson J. Brumme, Richard Haubrich, Thumbi Ndung'u, Jill Gilmour, Susan Allen, Malinda Schaefer, Mark A. Brockman, Karen A. Power, John Sidney, Charles E. DeZiel
Publikováno v:
Nature Medicine
Human leukocyte antigen class I (HLA)-restricted CD8(+) T lymphocyte (CTL) responses are crucial to HIV-1 control. Although HIV can evade these responses, the longer-term impact of viral escape mutants remains unclear, as these variants can also redu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5b07cb301885f410e672f04f28d0840b
https://hdl.handle.net/11858/00-001M-0000-002A-EF1E-1
https://hdl.handle.net/11858/00-001M-0000-002A-EF1E-1
Publikováno v:
Nucleic Acids Research
SCOPE is a novel parameter-free method for the de novo identification of potential regulatory motifs in sets of coordinately regulated genes. The SCOPE algorithm combines the output of three component algorithms, each designed to identify a particula
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::987730f70248ec8fbe10f2d450f5fd7b
https://doi.org/10.1093/nar/gkm310
https://doi.org/10.1093/nar/gkm310
Autor:
Martin J. Deymier, Jianming Tang, Matthew Price, William Kilembe, Tien-Ho Lin, David Heckerman, Charles E. DeZiel, Philip J. R. Goulder, Jian Peng, Jonathan M. Carlson, Todd M. Allen, Daniel T. Claiborne, Paul A. Goepfert, John Frater, Jessica L. Prince, Aaron M. Seese, Zachary Ende, Rebecca Batorsky, Jill Gilmour, Susan Allen, Malinda Schaefer, Thumbi Ndung'u, Roger L. Shapiro, Eric Hunter, Nichole R. Klatt, Daniela C. Monaco
Publikováno v:
Science. 345(6193)
HIV needs to be fit to transmit Although you might not think it, it's hard to catch HIV. Less than 1% of unprotected sexual exposures result in infection. What then leads to transmission? Carlson et al. determined the amino acid sequence of viruses i
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::aed1a296a8f7397424680b70049ec508
http://ora.ox.ac.uk/objects/uuid:dafcfc6c-4a77-4c24-9b74-2c44367cf84b
http://ora.ox.ac.uk/objects/uuid:dafcfc6c-4a77-4c24-9b74-2c44367cf84b
Autor:
Mark A. Brockman, Sharon A. Riddler, P. Richard Harrigan, Chanson J. Brumme, Anh Q. Le, Richard Apps, Simon Mallal, George W. Nelson, Eric Martin, Charles E. DeZiel, Zabrina L. Brumme, Jonathan M. Carlson, David J.H.F. Knapp, Celia K. S. Chui, Mina John, Jennifer Listgarten, Laura A. Cotton, Richard Haubrich, Mary Carrington, Nico Pfeifer, David Heckerman
HLA class I-associated polymorphisms identified at the population level mark viral sites under immune pressure by individual HLA alleles. As such, analysis of their distribution, frequency, location, statistical strength, sequence conservation, and o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::acb8245473b7ba205f599d7411807c35
https://europepmc.org/articles/PMC3503140/
https://europepmc.org/articles/PMC3503140/
Autor:
Robert H. Gross, Arijit Chakravarty, Radhika S. Khetani, Charles E. DeZiel, Jonathan M. Carlson
Publikováno v:
Bioinformatics (Oxford, England). 23(8)
Motivation: Many transcription factors bind to sites that are long and loosely related to each other. De novo identification of such motifs is computationally challenging. In this article, we propose a novel semi-greedy algorithm over the space of al
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::95906aa80c776a4abffc546c9197defe
https://pubmed.ncbi.nlm.nih.gov/17470480
https://pubmed.ncbi.nlm.nih.gov/17470480
Autor:
Arijit Chakravarty, Jonathan M. Carlson, Radhika S. Khetani, Charles E. DeZiel, Robert H. Gross
Publikováno v:
Bioinformatics; Apr2007, Vol. 23 Issue 8, p1029-1031, 3p