Thousands of small, novel genes predicted in global phage genomes

Autor: Brayon J. Fremin, Ami S. Bhatt, Nikos C. Kyrpides, Aditi Sengupta, Alexander Sczyrba, Aline Maria da Silva, Alison Buchan, Amelie Gaudin, Andreas Brune, Ann M. Hirsch, Anthony Neumann, Ashley Shade, Axel Visel, Barbara Campbell, Brett Baker, Brian P. Hedlund, Byron C. Crump, Cameron Currie, Charlene Kelly, Chris Craft, Christina Hazard, Christopher Francis, Christopher W. Schadt, Colin Averill, Courtney Mobilian, Dan Buckley, Dana Hunt, Daniel Noguera, David Beck, David L. Valentine, David Walsh, Dawn Sumner, Despoina Lymperopoulou, Devaki Bhaya, Donald A. Bryant, Elise Morrison, Eoin Brodie, Erica Young, Erik Lilleskov, Eva Högfors-Rönnholm, Feng Chen, Frank Stewart, Graeme W. Nicol, Hanno Teeling, Harry R. Beller, Hebe Dionisi, Hui-Ling Liao, J. Michael Beman, James Stegen, James Tiedje, Janet Jansson, Jean VanderGheynst, Jeanette Norton, Jeff Dangl, Jeffrey Blanchard, Jennifer Bowen, Jennifer Macalady, Jennifer Pett-Ridge, Jeremy Rich, Jérôme P. Payet, John D. Gladden, Jonathan D. Raff, Jonathan L. Klassen, Jonathan Tarn, Josh Neufeld, Kelly Gravuer, Kirsten Hofmockel, Ko-Hsuan Chen, Konstantinos Konstantinidis, Kristen M. DeAngelis, Laila P. Partida-Martinez, Laura Meredith, Ludmila Chistoserdova, Mary Ann Moran, Matthew Scarborough, Matthew Schrenk, Matthew Sullivan, Maude David, Michelle A. O'Malley, Monica Medina, Mussie Habteselassie, Nicholas D. Ward, Nicole Pietrasiak, Olivia U. Mason, Patrick O. Sorensen, Paulina Estrada de los Santos, Petr Baldrian, R. Michael McKay, Rachel Simister, Ramunas Stepanauskas, Rebecca Neumann, Rex Malmstrom, Ricardo Cavicchioli, Robert Kelly, Roland Hatzenpichler, Roman Stocker, Rose Ann Cattolico, Ryan Ziels, Rytas Vilgalys, Sara Blumer-Schuette, Sean Crowe, Simon Roux, Steven Hallam, Steven Lindow, Susan H. Brawley, Susannah Tringe, Tanja Woyke, Thea Whitman, Thomas Bianchi, Thomas Mock, Timothy Donohue, Timothy Y. James, Udaya C. Kalluri, Ulas Karaoz, Vincent Denef, Wen-Tso Liu, William Whitman, Yang Ouyang

Publikováno v: Cell Rep

Small genes (40,000 small-gene families in ~2.3 million phage genome contigs. We find that small genes in phage genomes are approximately 3-fold more prevalent than in host prokaryotic genomes. Our approach enriches for small genes that are translate

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7811364742ad68dd9e3a080fb28629f4
https://doi.org/10.1016/j.celrep.2022.110984