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Molecular cytogenetic map visualizes the heterozygotic genome and identifies translocation chromosomes in Citrus sinensis

Autor: Shipeng Song, Hui Liu, Luke Miao, Li He, Wenzhao Xie, Hong Lan, Changxiu Yu, Wenkai Yan, Yufeng Wu, Xiao-peng Wen, Qiang Xu, Xiuxin Deng, Chunli Chen

Publikováno v: Journal of Genetics and Genomics.

Citrus sinensis is the most cultivated and economically valuable Citrus species in the world, whose genome has been assembled by three generation sequencing. However, chromosome recognition remains a problem due to the small size of chromosomes, and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4d4e70f2c53281cf9d4b4ea18711e7ff
https://doi.org/10.1016/j.jgg.2022.12.003

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Temperature-sensitive male sterility in rice determined by the roles of AGO1d in reproductive phasiRNA biogenesis and function

Autor: Chuanlin Shi, Jie Zhang, Bingjin Wu, Rachel Jouni, Changxiu Yu, Blake C. Meyers, Wanqi Liang, Qili Fei

Publikováno v: The New phytologistReferences. 236(4)

Phased secondary siRNAs (phasiRNAs) are broadly present in the reproductive tissues of flowering plants, with spatial-temporal specificity. However, the ARGONAUTE (AGO) proteins associated with phasiRNAs and their miRNA triggers remain elusive. Here,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::266bcd36f47cc366d6c904ce1c078a28
https://pubmed.ncbi.nlm.nih.gov/36031742

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Genome-wide identification, characterization, interaction network and expression profile of GRAS gene family in sweet orange (Citrus sinensis)

Autor: Changxiu Yu, Hua Zhang, Long Xu, Chen Li, Limin Mi, Chunli Chen

Publikováno v: Scientific Reports, Vol 9, Iss 1, Pp 1-16 (2019)
Scientific Reports

GRAS genes are suggested to be grouped into plant-specific transcriptional regulatory families that have been reported to participate in multiple processes, including plant development, phytohormone signaling, the formation of symbiotic relationships

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a174785becc074c8187ad743bb351c3e
http://link.springer.com/article/10.1038/s41598-018-38185-z

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Genomic monitoring of SARS-CoV-2 uncovers an Nsp1 deletion variant that modulates type I interferon response

Autor: Kaiju Li, Ran Zhou, Yichen Yan, Yaoyao Zhang, Zhidan Li, Wei Fan, Shusen He, Ling Ya Cao, Chuan. Chen, Qingfeng Li, Huiping Yang, ShiKun Lei, Zhen Zhen Zhou, Yuquan Wei, Mengjiao Li, Binwu Ying, Yingfen Liu, Jiufeng Sun, Ping He, Bowen Ke, Eric J. Snijder, Yunzi Luo, Chengdi Wang, Ming Zhang, Xia Xiao, Hongping Wei, Wanqin Zeng, Olli Vapalahti, Yuancun Zhao, Xiuran Zheng, Qingxin Yang, Chang-ling Li, Lev Levanov, Yupeng Li, Liping Wang, Thomas R. Connor, Danrui Wang, Guangwen Lu, Yongmei Jiang, Lifang Zhou, Huayi Liu, Junwei Song, Zhiyong Xu, Han-cheng Wei, Ming-xia Yu, Teemu Smura, Minjin Wang, Xinqiong Li, Lu Yang Cheng, Ke Sun, Ruirui Yang, Li Chen, Ming Pan, Lu Chen, Wei Hong, Mengying Xu, Natacha S. Ogando, Dan Ning Zhang, Jing-wen Lin, Yi Zha, Jia Geng, Wenjie Tan, Jiannan Xu, Chao Tang, Changxiu Yu, Yongzhao Zhou, Baowen Du, Lingyu Jiang, Yiming Zhang, Fei Ye, Weimin Li, Sha-sha Chen, Feng Luo, Suvi Kuivanen

Publikováno v: Cell Host & Microbe
Cell Host & Microbe, 29(3), 489-502.e8

The SARS-CoV-2 virus, the causative agent of COVID-19, is undergoing constant mutation. Here, we utilized an integrative approach combining epidemiology, virus genome sequencing, clinical phenotyping, and experimental validation to locate mutations o

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3777682dfe57f93221e7847280c7685e
https://aaltodoc.aalto.fi/handle/123456789/102598

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