Kinome-wide screening uncovers a role for Bromodomain Protein 3 in DNA double-stranded break repair

Autor: Wang, Chen, Chan, Doug W., Hendrickson, Eric A.

Publikováno v: In DNA Repair February 2023 122

Proteogenomic Characterization of Endometrial Carcinoma

Autor: Agarwal, Anupriya, Anurag, Meenakshi, Avtonomov, Dmitry, Birger, Chet, Birrer, Michael J., Boca, Simina M., Bocik, William E., Borate, Uma, Borucki, Melissa, Burke, Meghan C., Cai, Shuang, Calinawan, Anna, Carr, Steven A., Carter, Sonya, Castro, Patricia, Cerda, Sandra, Chaikin, Michelle, Chan, Daniel W., Chan, Doug, Charamut, Alyssa, Chen, Feng, Chen, Jin, Chen, Lijun, Chen, Lin S., Chesla, David, Chheda, Milan G., Chinnaiyan, Arul M., Chowdhury, Shrabanti, Cieslik, Marcin P., Clark, David J., Cottingham, Sandra, Culpepper, Houston, Day, Jacob, De Young, Stephanie, Demir, Emek, Dhanasekaran, Saravana Mohan, Dhir, Rajiv, Domagalski, Marcin J., Dottino, Peter, Druker, Brian, Duffy, Elizabeth, Dyer, Maureen, Edwards, Nathan J., Edwards, Robert, Elburn, Kim, Field, Jayson B., Francis, Alicia, Gabriel, Stacey, Geffen, Yifat, Geiszler, Daniel, Gillette, Michael A., Godwin, Andrew K., Grady, Pamela, Hannick, Linda, Hariharan, Pushpa, Hilsenbeck, Sue, Hindenach, Barbara, Hoadley, Katherine A., Hong, Runyu, Hostetter, Galen, Hsieh, James J., Hu, Yingwei, Ittmann, Michael M., Jaehnig, Eric, Jewell, Scott D., Ji, Jiayi, Jones, Corbin D., Karabon, Renee, Ketchum, Karen A., Khan, Munziba, Kim, Beom-Jun, Krek, Azra, Krubit, Tanya, Kumar-Sinha, Chandan, Leprevost, Felipe D., Lewis, Michael, Li, Qing Kay, Li, Yize, Liu, Hongwei, Lubinski, Jan, Ma, Weiping, Madan, Rashna, Malc, Ewa, Malovannaya, Anna, Mareedu, Sailaja, Markey, Sanford P., Marrero-Oliveras, Annette, Martignetti, John, McDermott, Jason, McGarvey, Peter B., McGee, John, Mieczkowski, Piotr, Modugno, Francesmary, Montgomery, Rebecca, Newton, Chelsea J., Omenn, Gilbert S., Paulovich, Amanda G., Perou, Amy M., Petralia, Francesca, Piehowski, Paul, Polonskaya, Larisa, Qi, Liqun, Richey, Shannon, Robinson, Karna, Roche, Nancy, Rohrer, Daniel C., Schadt, Eric E., Schnaubelt, Michael, Shi, Yan, Skelly, Tara, Sokoll, Lori J., Song, Xiaoyu, Stein, Stephen E., Suh, James, Tan, Donghui, Tansil, Darlene, Teo, Guo Ci, Thangudu, Ratna R., Tognon, Cristina, Traer, Elie, Tyner, Jeffrey, Um, Ki Sung, Valley, Dana R., Vatanian, Negin, Vats, Pankaj, Velvulou, Uma, Vernon, Michael, Wang, Liang-Bo, Wang, Ying, Webster, Alex, Westbrook, Thomas, Wheeler, David, Whiteaker, Jeffrey R., Wilson, George D., Zakhartsev, Yuriy, Zelt, Robert, Zhang, Hui, Zhang, Yuping, Zhang, Zhen, Zhao, Grace, Dou, Yongchao, Kawaler, Emily A., Cui Zhou, Daniel, Gritsenko, Marina A., Huang, Chen, Blumenberg, Lili, Karpova, Alla, Petyuk, Vladislav A., Savage, Sara R., Satpathy, Shankha, Liu, Wenke, Wu, Yige, Tsai, Chia-Feng, Wen, Bo, Li, Zhi, Cao, Song, Moon, Jamie, Shi, Zhiao, Cornwell, MacIntosh, Wyczalkowski, Matthew A., Chu, Rosalie K., Vasaikar, Suhas, Zhou, Hua, Gao, Qingsong, Moore, Ronald J., Li, Kai, Sethuraman, Sunantha, Monroe, Matthew E., Zhao, Rui, Heiman, David, Krug, Karsten, Clauser, Karl, Kothadia, Ramani, Maruvka, Yosef, Pico, Alexander R., Oliphant, Amanda E., Hoskins, Emily L., Pugh, Samuel L., Beecroft, Sean J.I., Adams, David W., Jarman, Jonathan C., Kong, Andy, Chang, Hui-Yin, Reva, Boris, Liao, Yuxing, Rykunov, Dmitry, Colaprico, Antonio, Chen, Xi Steven, Czekański, Andrzej, Jędryka, Marcin, Matkowski, Rafał, Wiznerowicz, Maciej, Hiltke, Tara, Boja, Emily, Kinsinger, Christopher R., Mesri, Mehdi, Robles, Ana I., Rodriguez, Henry, Mutch, David, Fuh, Katherine, Ellis, Matthew J., DeLair, Deborah, Thiagarajan, Mathangi, Mani, D.R., Getz, Gad, Noble, Michael, Nesvizhskii, Alexey I., Wang, Pei, Anderson, Matthew L., Levine, Douglas A., Smith, Richard D., Payne, Samuel H., Ruggles, Kelly V., Rodland, Karin D., Ding, Li, Zhang, Bing, Liu, Tao, Fenyö, David

Publikováno v: In Cell 20 February 2020 180(4):729-748

Integrated Proteogenomic Characterization of Clear Cell Renal Cell Carcinoma

Autor: Hashimi, Abdul Samad, Pico, Alexander R., Karpova, Alla, Charamut, Alyssa, Paulovich, Amanda G., Perou, Amy M., Malovannaya, Anna, Marrero-Oliveras, Annette, Agarwal, Anupriya, Hindenach, Barbara, Pruetz, Barbara, Kim, Beom-Jun, Druker, Brian J., Newton, Chelsea J., Birger, Chet, Jones, Corbin D., Tognon, Cristina, Mani, D.R., Valley, Dana R., Rohrer, Daniel C., Zhou, Daniel C., Tansil, Darlene, Chesla, David, Heiman, David, Wheeler, David, Tan, Donghui, Chan, Doug, Demir, Emek, Malc, Ewa, Modugno, Francesmary, Getz, Gaddy, Hostetter, Galen, Wilson, George D., Hart, Gerald W., Zhu, Heng, Liu, Hongwei, Culpepper, Houston, Sun, Hua, Zhou, Hua, Day, Jacob, Suh, James, Huang, Jasmine, McDermott, Jason, Whiteaker, Jeffrey R., Tyner, Jeffrey W., Eschbacher, Jennifer, Chen, Jin, McGee, John, Zhu, Jun, Ketchum, Karen A., Rodland, Karin D., Clauser, Karl, Robinson, Karna, Krug, Karsten, Hoadley, Katherine A., Um, Ki Sung, Elburn, Kim, Holloway, Kimberly, Wang, Liang-Bo, Blumenberg, Lili, Hannick, Linda, Qi, Liqun, Sokoll, Lori J., Cornwell, MacIntosh, Loriaux, Marc, Domagalski, Marcin J., Gritsenko, Marina A., Anderson, Matthew, Monroe, Matthew E., Ellis, Matthew J., Dyer, Maureen, Anurag, Meenakshi, Burke, Meghan C., Borucki, Melissa, Gillette, Michael A., Birrer, Michael J., Lewis, Michael, Ittmann, Michael M., Smith, Michael, Vernon, Michael, Chaikin, Michelle, Chheda, Milan G., Khan, Munziba, Roche, Nancy, Edwards, Nathan J., Vatanian, Negin, Tignor, Nicole, Beckmann, Noam, Grady, Pamela, Castro, Patricia, Piehowski, Paul, McGarvey, Peter B., Mieczkowski, Piotr, Hariharan, Pushpa, Gao, Qingsong, Dhir, Rajiv, Kothadia, Ramani Bhupendra, Thangudu, Ratna R., Montgomery, Rebecca, Jayasinghe, Reyka G., Smith, Richard D., Edwards, Robert, Zelt, Robert, Bremner, Ross, Liu, Ruiyang, Hong, Runyu, Mareedu, Sailaja, Payne, Samuel H., Cottingham, Sandra, Markey, Sanford P., Jewell, Scott D., Patel, Shalin, Satpathy, Shankha, Richey, Shannon, Davies, Sherri R., Cai, Shuang, Boca, Simina M., Patil, Snehal, Sengupta, Sohini, Carter, Sonya, Gabriel, Stacey, Thomas, Stefani N., De Young, Stephanie, Stein, Stephen E., Carr, Steven A., Foltz, Steven M., Hilsenbeck, Sue, Krubit, Tanya, Liu, Tao, Skelly, Tara, Westbrook, Thomas, Borate, Uma, Velvulou, Uma, Petyuk, Vladislav A., Bocik, William E., Chen, Xi, Shi, Yan, Geffen, Yifat, Lu, Yihao, Wang, Ying, Maruvka, Yosef, Li, Zhi, Shi, Zhiao, Tu, Zhidong, Clark, David J., Dhanasekaran, Saravana M., Petralia, Francesca, Pan, Jianbo, Song, Xiaoyu, Hu, Yingwei, da Veiga Leprevost, Felipe, Reva, Boris, Lih, Tung-Shing M., Chang, Hui-Yin, Ma, Weiping, Huang, Chen, Ricketts, Christopher J., Chen, Lijun, Krek, Azra, Li, Yize, Rykunov, Dmitry, Li, Qing Kay, Chen, Lin S., Ozbek, Umut, Vasaikar, Suhas, Wu, Yige, Yoo, Seungyeul, Chowdhury, Shrabanti, Wyczalkowski, Matthew A., Ji, Jiayi, Schnaubelt, Michael, Kong, Andy, Sethuraman, Sunantha, Avtonomov, Dmitry M., Ao, Minghui, Colaprico, Antonio, Cao, Song, Cho, Kyung-Cho, Kalayci, Selim, Ma, Shiyong, Liu, Wenke, Ruggles, Kelly, Calinawan, Anna, Gümüş, Zeynep H., Geiszler, Daniel, Kawaler, Emily, Teo, Guo Ci, Wen, Bo, Zhang, Yuping, Keegan, Sarah, Li, Kai, Chen, Feng, Edwards, Nathan, Pierorazio, Phillip M., Chen, Xi Steven, Pavlovich, Christian P., Hakimi, A. Ari, Brominski, Gabriel, Hsieh, James J., Antczak, Andrzej, Omelchenko, Tatiana, Lubinski, Jan, Wiznerowicz, Maciej, Linehan, W. Marston, Kinsinger, Christopher R., Thiagarajan, Mathangi, Boja, Emily S., Mesri, Mehdi, Hiltke, Tara, Robles, Ana I., Rodriguez, Henry, Qian, Jiang, Fenyö, David, Zhang, Bing, Ding, Li, Schadt, Eric, Chinnaiyan, Arul M., Zhang, Zhen, Omenn, Gilbert S., Cieslik, Marcin, Chan, Daniel W., Nesvizhskii, Alexey I., Wang, Pei, Zhang, Hui

Publikováno v: In Cell 31 October 2019 179(4):964-983

gpGrouper: A Peptide Grouping Algorithm for Gene-Centric Inference and Quantitation of Bottom-Up Proteomics Data

Autor: Saltzman, Alexander B. ^‡, Leng, Mei ^‡, Bhatt, Bhoomi ^‡, Singh, Purba ^§, Chan, Doug W. ^§, Dobrolecki, Lacey ^{§, **}, Chandrasekaran, Hamssika ^¶, Choi, Jong M. ^¶, Jain, Antrix ^¶, Jung, Sung Y. ^{‡, ¶}, Lewis, Michael T. ^{§, ‖, **, ‡‡}, Ellis, Matthew J. ^{§, ‖, ‡‡}, Malovannaya, Anna ^{‡, ‡‡, ¶, ‖, §§}

Publikováno v: In Molecular & Cellular Proteomics November 2018 17(11):2270-2283

Protein-DNA Complexes Containing DNA-Dependent Protein Kinase in Crude Extracts from Human and Rodent Cells

Autor: Chan, Doug W., Lintott, Lauri G., Allalunis-Turner, Joan, Lees-Miller, Susan P.

Publikováno v: Radiation Research, 1999 Apr 01. 151(4), 414-422.

Externí odkaz: https://www.jstor.org/stable/3579828