Zobrazeno 1 - 10
of 80
pro vyhledávání: '"Cecilia N. Arighi"'
Publikováno v:
Evolutionary Bioinformatics, Vol 2, Pp 197-209 (2006)
The PIRSF protein classification system (http://pir.georgetown.edu/pirsf/) reflects evolutionary relationships of full-length proteins and domains. The primary PIRSF classification unit is the homeomorphic family, whose members are both homologous (e
Externí odkaz:
https://doaj.org/article/5d60cde62fa0425b974b79f57627a063
Autor:
Anastasia N. Nikolskaya, Cecilia N. Arighi, Hongzhan Huang, Winona C. Barker, Cathy H. Wu Ph.D.
Publikováno v:
Evolutionary Bioinformatics, Vol 2 (2006)
The PIRSF protein classification system ( http://pir.georgetown.edu/pirsf/ ) reflects evolutionary relationships of full-length proteins and domains. The primary PIRSF classification unit is the homeomorphic family, whose members are both homologous
Externí odkaz:
https://doaj.org/article/be2f4fe243f642f3a2cb92bd37c9cee7
Autor:
Xiangying Jiang, Daniela Raciti, Hagit Shatkay, Cynthia L. Smith, Cecilia N. Arighi, G. Elisabeta Marai, Pengyuan Li, Martin Ringwald, Juan Trelles Trabucco, Gongbo Zhang
Publikováno v:
Bioinformatics. 37:i468-i476
Motivation Biomedical research findings are typically disseminated through publications. To simplify access to domain-specific knowledge while supporting the research community, several biomedical databases devote significant effort to manual curatio
Autor:
Andrew Chatr-aryamontri, Lynette Hirschman, Karen E Ross, Rose Oughtred, Martin Krallinger, Kara Dolinski, Mike Tyers, Tonia Korves, Cecilia N Arighi
Publikováno v:
Database : the journal of biological databases and curation. 2022
The coronavirus disease 2019 (COVID-19) pandemic has compelled biomedical researchers to communicate data in real time to establish more effective medical treatments and public health policies. Nontraditional sources such as preprint publications, i.
Automated relation extraction (RE) from biomedical literature is critical for many downstream text mining applications in both research and real-world settings. However, most existing benchmarking datasets for bio-medical RE only focus on relations o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7fef1eeed2c2bbf6404467a89fb8ab4b
http://arxiv.org/abs/2204.04263
http://arxiv.org/abs/2204.04263
Autor:
Cathy H. Wu, Cecilia N. Arighi, Darren A. Natale, Hongzhan Huang, Chuming Chen, Julie E Cowart, Karen E. Ross
Publikováno v:
Scientific Data, Vol 7, Iss 1, Pp 1-12 (2020)
Scientific Data
Scientific Data
The Protein Ontology (PRO) provides an ontological representation of protein-related entities, ranging from protein families to proteoforms to complexes. Protein Ontology Linked Open Data (LOD) exposes, shares, and connects knowledge about protein-re
Autor:
Michele Magrane, Sandra Orchard, George Georghiou, Ruth C. Lovering, Livia Perfetto, Lionel Breuza, Sylvain Poux, Ghislaine Argoud-Puy, Cristina Casals-Casas, Nadine Gruaz-Gumowski, Shyamala Sundaram, Maria Livia Famiglietti, Elizabeth Wu, Ursula Hinz, Arnaud Gos, Barbara Kramarz, Yvonne Lussi, Christian J. Stoeckert, Cecilia N. Arighi, Anne Estreicher, Milagros Rodríguez-López, Li-San Wang, Nevila Hyka-Nouspikel, Patrick Masson
Publikováno v:
Journal of Alzheimer's Disease
Background: The analysis and interpretation of data generated from patient-derived clinical samples relies on access to high-quality bioinformatics resources. These are maintained and updated by expert curators extracting knowledge from unstructured
Publikováno v:
Communications Biology, Vol 3, Iss 1, Pp 1-12 (2020)
Communications Biology
Communications Biology
Numerous cell surface receptors and receptor-like proteins (RLPs) undergo activation or deactivation via a transmembrane domain (TMD). A subset of plant RLPs distinctively localizes to the plasma membrane-lined pores called plasmodesmata. Those RLPs
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 9, p e1004391 (2015)
MicroRNAs (miRNAs) regulate a wide range of cellular and developmental processes through gene expression suppression or mRNA degradation. Experimentally validated miRNA gene targets are often reported in the literature. In this paper, we describe miR
Externí odkaz:
https://doaj.org/article/b7b4a10aa6004ae586473d7a7592ddd7
Publikováno v:
Database: The Journal of Biological Databases and Curation
microRNAs (miRNAs) are essential gene regulators, and their dysregulation often leads to diseases. Easy access to miRNA information is crucial for interpreting generated experimental data, connecting facts across publications and developing new hypot