Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Catherine Troman"'
Autor:
Dimitra Klapsa, Thomas Wilton, Andrew Zealand, Erika Bujaki, Eugene Saxentoff, Catherine Troman, Alexander G Shaw, Alison Tedcastle, Manasi Majumdar, Ryan Mate, Joyce O Akello, Shahin Huseynov, Ali Zeb, Maria Zambon, Anita Bell, José Hagan, Matthew J Wade, Mary Ramsay, Nicholas C Grassly, Vanessa Saliba, Javier Martin
Publikováno v:
Lancet
BACKGROUND: The international spread of poliovirus exposes all countries to the risk of outbreaks and is designated a Public Health Emergency of International Concern by WHO. This risk can be exacerbated in countries using inactivated polio vaccine,
Autor:
Joyce Odeke Akello, Erika Bujaki, Alexander G. Shaw, Adnan Khurshid, Yasir Arshad, Catherine Troman, Manasi Majumdar, Áine O'Toole, Andrew Rambaut, Muhammad Masroor Alam, Javier Martin, Nicholas C. Grassly
Publikováno v:
Akello, J O, Bujaki, E, Shaw, A G, Khurshid, A, Arshad, Y, Troman, C, Majumdar, M, O'Toole, Á, Rambaut, A, Alam, M M, Martin, J, Grassly, N C & Le goff, J (ed.) 2023, ' Comparison of eleven RNA extraction methods for poliovirus direct molecular detection in stool samples ', Microbiology Spectrum, vol. 11, no. 2, e0425222 . https://doi.org/10.1128/spectrum.04252-22
Direct detection by PCR of poliovirus RNA in stool samples provides a rapid diagnostic and surveillance tool that can replace virus isolation by cell culture in global polio surveillance. The sensitivity of direct detection methods is likely to depen
Autor:
Alexander Shaw, Tresor Kabeya Mampuela, Emmanuel Lokilo Lofiko, Catherine Pratt, Catherine Troman, Erika Bujaki, Aine O'Toole, Joyce Akello, Adrienne Amuri Aziza, Eddy Kinganda Lusamaki, Jean-Claude Makangara Cigolo, Marceline Akonga, Yvonne Lay, Bibiche Nsunda, Bailey White, David Jorgensen, Elisabeth Pukuta, Yogolelo Riziki, Kathleen Rankin, Andrew Rambaut, Steve Ahuka-Mundeke, Jean-Jacques Muyembe, Javier Martin, Nicholas Grassly, Placide Mbala-Kingebeni
Delayed detection of poliovirus outbreaks is a major threat to polio eradication. Direct molecular Detection and Nanopore Sequencing (DDNS) of stool samples shows promise as a faster method to detect and confirm polio cases compared with cell culture
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::34071600a4fe63d8e60fc9fb6f1acfa8
https://doi.org/10.21203/rs.3.rs-2701488/v1
https://doi.org/10.21203/rs.3.rs-2701488/v1
This protocol is updated from the protocol described in the paper "Rapid and sensitive direct detection and identification of poliovirus from stool and environmental surveillance samples using nanopore sequencing" by Shaw et al in the Journal of Clin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ab9fe0c626bd398a36f70cace95c576a
https://doi.org/10.17504/protocols.io.b5pyq5pw
https://doi.org/10.17504/protocols.io.b5pyq5pw
Autor:
Alex Shaw, Catherine Troman, Joyce Akello, Erika Bujaki, Manasi Majumdar, Javier Martin, Nick Grassly
This short FAQ document summarises the poliovirus direct detection and nanopore sequencing (DDNS) protocol, the equipment and reagents required, the cost and staff-time involved (Feb 2022).
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::8a62538093c95a5c6fc5a081554c77f1
https://doi.org/10.17504/protocols.io.b5ggq3tw
https://doi.org/10.17504/protocols.io.b5ggq3tw
Autor:
Venkata Raghava Mohan, Catherine Troman, Srinivasan R, Nicholas A. Feasey, Rigby J, Dilip Abraham, Nicola Elviss, Gagandeep Kang, Satheesh Nair, Uzzell Cb, Jacob John, Nicholas C. Grassly, John Scott Meschke
Background The World Health Organisation recommends prioritised use of recently prequalified typhoid conjugate vaccines in countries with the highest incidence of typhoid fever. However, representative typhoid surveillance data are lacking in many lo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1e7e6f4b6e56eae8d59a3ecac30f0409
https://doi.org/10.1101/2021.05.21.21257547
https://doi.org/10.1101/2021.05.21.21257547
This protocol is published in the paper "Rapid and sensitive direct detection and identification of poliovirus from stool and environmental surveillance samples using nanopore sequencing" by Shaw et al in the Journal of Clinical Microbiology (2020),
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::dae709c72e8c41a46ee1a328f41a075e
https://doi.org/10.17504/protocols.io.bf8zjrx6
https://doi.org/10.17504/protocols.io.bf8zjrx6
Autor:
Manasi Majumdar, Lubna Rehman, Mehar Angez, Dilip Abraham, Nayab Mahmood, Muhammad Salman, Nicholas C. Grassly, Catherine Troman, Yasir Arshad, Shahzad Shaukat, Alexander G. Shaw, Salmaan Sharif, Ananda S Bandyopadhyay, Gagandeep Kang, Javier Martin, Adnan Khurshid, Ribqa Akthar, Yara Hajarha, Blossom Benny, Andrew Rambaut, Ghulam Mujtaba, Ira Praharaj, Muhammad Masroor Alam, Dimitra Klapsa, Humayun Asghar, Áine O'Toole
Publikováno v:
Shaw, A G, Majumdar, M, Troman, C, O'toole, Á, Benny, B, Abraham, D, Praharaj, I, Kang, G, Sharif, S, Alam, M M, Shaukat, S, Angez, M, Khurshid, A, Mahmood, N, Arshad, Y, Rehman, L, Mujtaba, G, Akthar, R, Salman, M, Klapsa, D, Hajarha, Y, Asghar, H, Bandyopadhyay, A, Rambaut, A, Martin, J & Grassly, N 2020, ' Rapid and sensitive direct detection and identification of poliovirus from stool and environmental surveillance samples using nanopore sequencing ', Journal of Clinical Microbiology, vol. 58, no. 9, e00920-20 . https://doi.org/10.1128/JCM.00920-20
Journal of Clinical Microbiology
Journal of Clinical Microbiology
Global poliovirus surveillance involves virus isolation from stool and environmental samples, intratypic differential (ITD) by PCR, and sequencing of the VP1 region to distinguish vaccine (Sabin), vaccine-derived, and wild-type polioviruses and to en
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::50562869802b9270b59d490cc49d7971