Redefining pandemic preparedness: Multidisciplinary insights from the CERP modelling workshop in infectious diseases, workshop report

Autor: Marta C. Nunes, Edward Thommes, Holger Fröhlich, Antoine Flahault, Julien Arino, Marc Baguelin, Matthew Biggerstaff, Gaston Bizel-Bizellot, Rebecca Borchering, Giacomo Cacciapaglia, Simon Cauchemez, Alex Barbier--Chebbah, Carsten Claussen, Christine Choirat, Monica Cojocaru, Catherine Commaille-Chapus, Chitin Hon, Jude Kong, Nicolas Lambert, Katharina B. Lauer, Thorsten Lehr, Cédric Mahe, Vincent Marechal, Adel Mebarki, Seyed Moghadas, Rene Niehus, Lulla Opatowski, Francesco Parino, Gery Pruvost, Andreas Schuppert, Rodolphe Thiébaut, Andrea Thomas-Bachli, Cecile Viboud, Jianhong Wu, Pascal Crépey, Laurent Coudeville

Publikováno v: Infectious Disease Modelling, Vol 9, Iss 2, Pp 501-518 (2024)

In July 2023, the Center of Excellence in Respiratory Pathogens organized a two-day workshop on infectious diseases modelling and the lessons learnt from the Covid-19 pandemic. This report summarizes the rich discussions that occurred during the work

Externí odkaz: https://doaj.org/article/394af13192574e7db6e0839ecd721b80

Revisiting locality-awareness in view of dynamically changing topologies

Autor: Carsten Clauss, Simon Pickartz, Antonello Monti, Stefan Lankes

Publikováno v: Parallel Computing. 77:1-18

As a general rule, when writing parallel applications according to the MPI standard, the programmer does not need to worry about the underlying hardware topology. This is because the MPI standard intentionally hides the actual hardware topology from

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::b2f37a4e65659d5f656934988f8c31ac
https://doi.org/10.1016/j.parco.2018.05.004

Simulation and optimization of nutrient uptake and biomass formation using a multi-parameter Monod-type model of tobacco BY-2 cell suspension cultures in a stirred-tank bioreactor

Autor: Henrik Nausch, Marco Baldan, Katrin Teichert, Jannik Lutz, Carsten Claussen, Michael Bortz, Johannes Felix Buyel

Publikováno v: Frontiers in Plant Science, Vol 14 (2023)

IntroductionTobacco (Nicotiana tabacum) cv Bright Yellow-2 (BY-2) cell suspension cultures enable the rapid production of complex protein-based biopharmaceuticals but currently achieve low volumetric productivity due to slow biomass formation. The bi

Externí odkaz: https://doaj.org/article/1485d5efc1bf411980aa9881d8a7a6d3

Supporting automatic recovery in offloaded distributed programming models through MPI-3 techniques

Autor: Thomas Moschny, Vicenç Beltran, Carsten Clauss, Antonio J. Peña

Publikováno v: ICS
Recercat. Dipósit de la Recerca de Catalunya
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UPCommons. Portal del coneixement obert de la UPC
Universitat Politècnica de Catalunya (UPC)

In this paper we describe the design of fault tolerance capabilities for general-purpose offload semantics, based on the OmpSs programming model. Using ParaStation MPI, a production MPI-3.1 implementation, we explore the features that, being standard

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::6c96aad34a8306610ecaefec27759a1f
https://doi.org/10.1145/3079079.3079093

Curating, Collecting, and Cataloguing Global COVID-19 Datasets for the Aim of Predicting Personalized Risk

Autor: Sepehr Golriz Khatami, Astghik Sargsyan, Maria Francesca Russo, Daniel Domingo-Fernández, Andrea Zaliani, Abish Kaladharan, Priya Sethumadhavan, Sarah Mubeen, Yojana Gadiya, Reagon Karki, Stephan Gebel, Ram Kumar Ruppa Surulinathan, Vanessa Lage-Rupprecht, Saulius Archipovas, Geltrude Mingrone, Marc Jacobs, Carsten Claussen, Martin Hofmann-Apitius, Alpha Tom Kodamullil

Publikováno v: Data, Vol 9, Iss 2, p 25 (2024)

Although hundreds of datasets have been published since the beginning of the coronavirus pandemic, there is a lack of centralized resources where these datasets are listed and harmonized to facilitate their applicability and uptake by predictive mode

Externí odkaz: https://doaj.org/article/e2d09c79499543abac869de80b7c4423