Evaluation of nine statistics to identify QTLs in bulk segregant analysis using next generation sequencing approaches

Autor: Carla de la Fuente Cantó, Yves Vigouroux

Publikováno v: BMC Genomics, Vol 23, Iss 1, Pp 1-12 (2022)

Abstract Background Bulk segregant analysis (BSA) combined with next generation sequencing is a powerful tool to identify quantitative trait loci (QTL). The impact of the size of the study population and the percentage of extreme genotypes analysed h

Externí odkaz: https://doaj.org/article/3e7beee1d0c942debc2380c87e472a18

Genetic dissection of quantitative and qualitative traits using a minimum set of barley Recombinant Chromosome Substitution Lines

Autor: Carla De la Fuente Cantó, Joanne Russell, Christine A. Hackett, Allan Booth, Siobhan Dancey, Timothy S. George, Robbie Waugh

Publikováno v: BMC Plant Biology, Vol 18, Iss 1, Pp 1-20 (2018)

Abstract Background Exploring the natural occurring genetic variation of the wild barley genepool has become a major target of barley crop breeding programmes aiming to increase crop productivity and sustainability in global climate change scenarios.

Externí odkaz: https://doaj.org/article/8877b48bfd214a2fa800a6f91dffa185

Identification of barley genetic regions influencing plant-microbe interactions and carbon cycling in soil

Autor: Lumbani Mwafulirwa, Joanne Russell, Carla de la Fuente Cantó, Christine A. Hackett, Nick Morley, Eric Paterson, Elizabeth M. Baggs

Publikováno v: Mwafulirwa, L, Baggs, L, Russell, J R, Hackett, C A, Morley, N, de la Fuente Cantó, C & Paterson, E 2021, ' Identification of barley genetic regions influencing plant-microbe interactions and carbon cycling in soil ', Plant and Soil, vol. 468, 468, pp. 165-182 . https://doi.org/10.1007/s11104-021-05113-6

Purpose Rhizodeposition shapes soil microbial communities that perform important processes such as soil C mineralization, but we have limited understanding of the plant genetic regions influencing soil microbes. Here, barley chromosome regions affect

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::22f2828f03c2c11f27f18a4e55fe7041
https://centaur.reading.ac.uk/99693/12/Mwafulirwa2021_Article_IdentificationOfBarleyGeneticR.pdf

Pearl millet genotype impacts microbial diversity and enzymatic activities in relation to root-adhering soil aggregation

Autor: Cheikh Mbacké Barry, Laurent Cournac, Mohamed Barakat, Wafa Achouak, Ibrahima Ndoye, Thierry Heulin, Philippe Ortet, Laurent Laplaze, Diamé Tine, Papa Mamadou Sitor Ndour, Bassirou Sine, M. Gueye, Carla de la Fuente Cantó

Publikováno v: Plant and Soil
Plant and Soil, 2021, 464, pp.109-129. ⟨10.1007/s11104-021-04917-w⟩
Plant and Soil, Springer Verlag, In press, 464, pp.109-129. ⟨10.1007/s11104-021-04917-w⟩

International audience; The interactions between plant roots and the associated microbiota impact soil aggregation, water retention and plant nutrient availability. Thus, selection of plant genotypes that promote microbial species involved in rootadh

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2fb015e669879a667a27cfdbb8d88389
https://amu.hal.science/hal-03337505/document

Genetic dissection of quantitative and qualitative traits using a minimum set of barley Recombinant Chromosome Substitution Lines

Autor: Robbie Waugh, Timothy S. George, Siobhan Dancey, Allan Booth, Carla de la Fuente Cantó, Joanne Russell, Christine A. Hackett

Publikováno v: BMC Plant Biology
BMC Plant Biology, Vol 18, Iss 1, Pp 1-20 (2018)

Background Exploring the natural occurring genetic variation of the wild barley genepool has become a major target of barley crop breeding programmes aiming to increase crop productivity and sustainability in global climate change scenarios. However

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbe19fc26f381849b368adfd32176e63
https://zenodo.org/record/2134525