Neural network auto-segmentation of serial-block-face scanning electron microscopy images exhibit collagen fibril structural differences with tendon type and health.

Autor: Bloom ET; Department of Biomedical Engineering, University of Delaware, Newark, Delaware, USA., Sabanayagam CR; Bio-Imaging Center, Delaware Biotechnology Institute, University of Delaware, Newark, Delaware, USA., Benson JM; Department of Biomedical Engineering, University of Delaware, Newark, Delaware, USA., Lin LM; Department of Biomedical Engineering, University of Delaware, Newark, Delaware, USA., Ross JL; Bio-Imaging Center, Delaware Biotechnology Institute, University of Delaware, Newark, Delaware, USA., Caplan JL; Bio-Imaging Center, Delaware Biotechnology Institute, University of Delaware, Newark, Delaware, USA.; Department of Plant and Soil Sciences, University of Delaware, Newark, Delaware, USA., Elliott DM; Department of Biomedical Engineering, University of Delaware, Newark, Delaware, USA.

Publikováno v: Journal of orthopaedic research : official publication of the Orthopaedic Research Society [J Orthop Res] 2024 Aug 23. Date of Electronic Publication: 2024 Aug 23.

CHUP1 restricts chloroplast movement and effector-triggered immunity in epidermal cells.

Autor: Nedo AO; Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19713, USA.; Department of Biological Sciences, University of Delaware, Newark, DE, 19716, USA., Liang H; Department of Computer & Information Sciences, University of Delaware, Newark, DE, 19716, USA., Sriram J; Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19713, USA., Razzak MA; Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19713, USA., Lee JY; Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19713, USA.; Department of Biological Sciences, University of Delaware, Newark, DE, 19716, USA., Kambhamettu C; Department of Computer & Information Sciences, University of Delaware, Newark, DE, 19716, USA., Dinesh-Kumar SP; Department of Plant Biology and The Genome Center, College of Biological Sciences, University of California, Davis, CA, 95616, USA., Caplan JL; Department of Plant and Soil Sciences, University of Delaware, Newark, DE, 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE, 19713, USA.; Department of Biological Sciences, University of Delaware, Newark, DE, 19716, USA.

Publikováno v: The New phytologist [New Phytol] 2024 Dec; Vol. 244 (5), pp. 1864-1881. Date of Electronic Publication: 2024 Oct 17.

The extracellular vesicle proteomes of Sorghum bicolor and Arabidopsis thaliana are partially conserved.

Autor: Chaya T; Department of Plant and Soil Sciences, University of Delaware, Newark, DE 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19716, USA., Banerjee A; Department of Plant and Soil Sciences, University of Delaware, Newark, DE 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19716, USA., Rutter BD; Department of Biology, Indiana University, Bloomington, IN 47405, USA., Adekanye D; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19716, USA.; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA., Ross J; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19716, USA., Hu G; The Laboratory for Biomolecular Structures, Brookhaven National Laboratory, Upton, NY 11973, USA., Innes RW; Department of Biology, Indiana University, Bloomington, IN 47405, USA., Caplan JL; Department of Plant and Soil Sciences, University of Delaware, Newark, DE 19716, USA.; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19716, USA.; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA.

Publikováno v: Plant physiology [Plant Physiol] 2024 Feb 29; Vol. 194 (3), pp. 1481-1497.

RNA degradome analysis reveals DNE1 endoribonuclease is required for the turnover of diverse mRNA substrates in Arabidopsis.

Autor: Nagarajan VK; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA., Stuart CJ; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA., DiBattista AT; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA., Accerbi M; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA., Caplan JL; Bio-Imaging Center, Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA., Green PJ; Delaware Biotechnology Institute, University of Delaware, Newark, DE 19713-1316, USA.

Publikováno v: The Plant cell [Plant Cell] 2023 May 29; Vol. 35 (6), pp. 1936-1955.

Kinesin-2 motors differentially impact biogenesis of extracellular vesicle subpopulations shed from sensory cilia.

Autor: Clupper M; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA., Gill R; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA., Elsayyid M; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA., Touroutine D; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA., Caplan JL; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA.; Department of Plant and Soil Sciences, University of Delaware, Newark, DE 19716, USA., Tanis JE; Department of Biological Sciences, University of Delaware, Newark, DE 19716, USA.

Publikováno v: IScience [iScience] 2022 Oct 04; Vol. 25 (11), pp. 105262. Date of Electronic Publication: 2022 Oct 04 (Print Publication: 2022).