Uveal melanoma immunogenomics predict immunotherapy resistance and susceptibility.

Autor: Leonard-Murali S; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA.; Department of Epidemiology, University of Pittsburgh, Pittsburgh, PA, USA., Bhaskarla C; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA., Yadav GS; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA., Maurya SK; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA., Galiveti CR; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA., Tobin JA; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA., Kann RJ; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA., Ashwat E; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA., Murphy PS; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA., Chakka AB; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA., Soman V; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA., Cantalupo PG; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA., Zhuo X; UPMC Genome Center, University of Pittsburgh, Pittsburgh, PA, USA., Vyas G; UPMC Genome Center, University of Pittsburgh, Pittsburgh, PA, USA., Kozak DL; UPMC Genome Center, University of Pittsburgh, Pittsburgh, PA, USA., Kelly LM; UPMC Genome Center, University of Pittsburgh, Pittsburgh, PA, USA., Smith E; UPMC Genome Center, University of Pittsburgh, Pittsburgh, PA, USA., Chandran UR; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; Department of Biomedical Informatics, University of Pittsburgh, Pittsburgh, PA, USA., Hsu YS; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA.; UPMC Immunologic Monitoring and Cellular Products Laboratory, University of Pittsburgh, Pittsburgh, PA, USA.; Division of Hematology/Oncology, Department of Medicine, University of Pittsburgh, Pittsburgh, PA, USA., Kammula US; UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA. kammulaus@upmc.edu.; Solid Tumor Cellular Immunotherapy Program, UPMC Hillman Cancer Center, University of Pittsburgh, Pittsburgh, PA, USA. kammulaus@upmc.edu.; Division of Surgical Oncology, Department of Surgery, University of Pittsburgh, Pittsburgh, PA, USA. kammulaus@upmc.edu.

Publikováno v: Nature communications [Nat Commun] 2024 Apr 16; Vol. 15 (1), pp. 2863. Date of Electronic Publication: 2024 Apr 16.

The pollen virome of wild plants and its association with variation in floral traits and land use.

Autor: Fetters AM; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA. fetters.38@osu.edu.; Department of Evolution, Ecology, and Organismal Biology, The Ohio State University, 318 W. 12th Avenue, Columbus, OH, 43210, USA. fetters.38@osu.edu., Cantalupo PG; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA.; Department of Biomedical Informatics, University of Pittsburgh, 5607 Baum Boulevard, Pittsburgh, PA, 15206, USA., Wei N; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA.; The Holden Arboretum, 9500 Sperry Road, Kirtland, OH, 44094, USA., Robles MTS; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA., Stanley A; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA., Stephens JD; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA.; Department of Biology, Westfield State University, 577 Western Avenue, Westfield, MA, 01086, USA., Pipas JM; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA., Ashman TL; Department of Biological Sciences, University of Pittsburgh, 4249 Fifth Avenue, Pittsburgh, PA, 15260, USA. tia1@pitt.edu.

Publikováno v: Nature communications [Nat Commun] 2022 Jan 26; Vol. 13 (1), pp. 523. Date of Electronic Publication: 2022 Jan 26.

Massive entry of BK Polyomavirus induces transient cytoplasmic vacuolization of human renal proximal tubule epithelial cells.

Autor: Lorentzen, Elias Myrvoll^1,2 (AUTHOR), Henriksen, Stian^1,2 (AUTHOR), Rinaldo, Christine Hanssen^1,2 (AUTHOR) christine.rinaldo@unn.no

Publikováno v: PLoS Pathogens. 11/21/2024, Vol. 20 Issue 11, p1-36. 36p.

Analysis of viruses present in urine from patients with interstitial cystitis.

Autor: Robles MTS; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA., Cantalupo PG; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA., Duray AM; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA., Freeland M; Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA., Murkowski M; Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA., van Bokhoven A; Department of Pathology, University of Colorado, Aurora, CO, USA., Stephens-Shields AJ; Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania Perlman School of Medicine, Philadelphia, PA, USA., Pipas JM; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, PA, USA., Imperiale MJ; Department of Microbiology and Immunology, University of Michigan, Ann Arbor, MI, USA. imperial@umich.edu.

Publikováno v: Virus genes [Virus Genes] 2020 Aug; Vol. 56 (4), pp. 430-438. Date of Electronic Publication: 2020 May 23.

Detecting viral sequences in NGS data.

Autor: Cantalupo PG; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA., Pipas JM; Department of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA. Electronic address: pipas@pitt.edu.

Publikováno v: Current opinion in virology [Curr Opin Virol] 2019 Dec; Vol. 39, pp. 41-48. Date of Electronic Publication: 2019 Aug 26.