Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Can Kockan"'
Publikováno v:
Georgetown Journal of International Affairs. 23:246-253
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::5114ce5d97d86385d34b693d76fca3d7
https://doi.org/10.1353/gia.2022.0037
https://doi.org/10.1353/gia.2022.0037
Publikováno v:
Cell Syst
Res Comput Mol Biol
Res Comput Mol Biol
Genotype imputation is an essential tool in genomics research, whereby missing genotypes are inferred using reference genomes to enhance downstream analyses. Recently, public imputation servers have allowed researchers to leverage large-scale genomic
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ff0b20550163c51ce68f54d008515968
https://pubmed.ncbi.nlm.nih.gov/34672957
https://pubmed.ncbi.nlm.nih.gov/34672957
Genotype imputation is an essential tool in genetics research, whereby missing genotypes are inferred based on a panel of reference genomes to enhance the power of downstream analyses. Recently, public imputation servers have been developed to allow
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3a6e4148ef346105713de0a78764c78f
https://doi.org/10.1101/2021.02.02.429428
https://doi.org/10.1101/2021.02.02.429428
Autor:
Can Kockan, David P. Woodruff, Nikolai Karpov, Natnatee Dokmai, M. Oğuzhan Külekci, S. Cenk Sahinalp, Kaiyuan Zhu
Publikováno v:
Nat Methods
Current practices in collaborative genomic data analysis (e.g. PCAWG) necessitate all involved parties to exchange individual patient data and perform all analysis locally, or use a trusted server for maintaining all data to perform analysis in a sin
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::06fff5e6c8bcf5bf4dd71ca926768583
https://europepmc.org/articles/PMC7423249/
https://europepmc.org/articles/PMC7423249/
Publikováno v:
IEEE BigData
Stellar data, only a few years ago, measured in the .1M of objects. Now, sets are routinely 1M. With the launch of ESA's Gaia in 2013, we expect 1000M stellar objects measured more precisely and with more measurements. Without question, astronomy is
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b0bfc5934c8fef61cef110a06b937d5e
https://doi.org/10.1109/bigdata.2017.8258215
https://doi.org/10.1109/bigdata.2017.8258215
Publikováno v:
Methods
Structural variations (SV) are broadly defined as genomic alterations that affect > 50 bp of DNA, which are shown to have significant effect on evolution and disease. The advent of high throughput sequencing (HTS) technologies and the ability to perf
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e340717ff308c02ffcff5b5f4ca4628
https://hdl.handle.net/11693/37315
https://hdl.handle.net/11693/37315
Autor:
Can Kockan, Brian McConeghy, Colin Collins, Baraa Orabi, Yen Yi Lin, Roberto Pili, Alexander R. Gawronski, S. Cenk Sahinalp, Faraz Hach, Hossein Asghari, Stephane LeBihan, Nabil Adra
Publikováno v:
Nucleic Acids Research
Motivation Cancer is a complex disease that involves rapidly evolving cells, often forming multiple distinct clones. In order to effectively understand progression of a patient-specific tumor, one needs to comprehensively sample tumor DNA at multiple
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cb026dfff00fc8314133a50002dc7c00
http://europepmc.org/articles/PMC6468241
http://europepmc.org/articles/PMC6468241
Autor:
Alexander W. Wyatt, Anne Haegert, Stanislav Volik, Robert H. Bell, Iman Sarrafi, Faraz Hach, Kim N. Chi, Kevin Beja, Colin Collins, Can Kockan, S. Cenk Sahinalp, Brian McConeghy
Publikováno v:
Bioinformatics (Oxford, England). 33(1)
Motivation Successful development and application of precision oncology approaches require robust elucidation of the genomic landscape of a patient’s cancer and, ideally, the ability to monitor therapy-induced genomic changes in the tumour in an in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f001ed8efc918d1d046c50aa858d1f70
https://pubmed.ncbi.nlm.nih.gov/27531099
https://pubmed.ncbi.nlm.nih.gov/27531099