Zobrazeno 1 - 10
of 16
pro vyhledávání: '"Camden Jansen"'
Autor:
Stefania Forner, Shimako Kawauchi, Gabriela Balderrama-Gutierrez, Enikö A. Kramár, Dina P. Matheos, Jimmy Phan, Dominic I. Javonillo, Kristine M. Tran, Edna Hingco, Celia da Cunha, Narges Rezaie, Joshua A. Alcantara, David Baglietto-Vargas, Camden Jansen, Jonathan Neumann, Marcelo A. Wood, Grant R. MacGregor, Ali Mortazavi, Andrea J. Tenner, Frank M. LaFerla, Kim N. Green
Publikováno v:
Scientific Data, Vol 8, Iss 1, Pp 1-16 (2021)
Measurement(s) Protein Expression • gene expression • electrophysiology data • protein measurement • behavior Technology Type(s) immunofluorescence microscopy assay • RNA sequencing • electrophysiology assay • Electrochemiluminescence I
Externí odkaz:
https://doaj.org/article/b2396bfe67d3413cbec4c74a4d952aef
Autor:
Camden Jansen, Ricardo N Ramirez, Nicole C El-Ali, David Gomez-Cabrero, Jesper Tegner, Matthias Merkenschlager, Ana Conesa, Ali Mortazavi
Publikováno v:
PLoS Computational Biology, Vol 15, Iss 11, p e1006555 (2019)
Rapid advances in single-cell assays have outpaced methods for analysis of those data types. Different single-cell assays show extensive variation in sensitivity and signal to noise levels. In particular, scATAC-seq generates extremely sparse and noi
Externí odkaz:
https://doaj.org/article/30280c738dbf4172aaf72672d319abd0
Publikováno v:
Journal of Statistical Software, Vol 56, Iss 1, Pp 1-31 (2014)
Researchers are often faced with analyzing data sets that are not complete. To prop- erly analyze such data sets requires the knowledge of the missing data mechanism. If data are missing completely at random (MCAR), then many missing data analysis te
Externí odkaz:
https://doaj.org/article/7f0c1c397c1a4bac9fe2b03f2cf11680
Autor:
Guanjue Xiang, Xi He, Belinda M. Giardine, Kathryn J. Weaver, Dylan J. Taylor, Rajiv C. McCoy, Camden Jansen, Cheryl A. Keller, Alexander Q. Wixom, April Cockburn, Amber Miller, Qian Qi, Yanghua He, Yichao Li, Jens Lichtenberg, Elisabeth F. Heuston, Stacie M. Anderson, Jing Luan, Marit W. Vermunt, Feng Yue, Michael E.G. Sauria, Michael C. Schatz, James Taylor, Berthold Göttgens, Jim R. Hughes, Douglas R. Higgs, Mitchell J. Weiss, Yong Cheng, Gerd A. Blobel, David Bodine, Yu Zhang, Qunhua Li, Shaun Mahony, Ross C. Hardison
Knowledge of locations and activities ofcis-regulatory elements (CREs) is needed to decipher basic mechanisms of gene regulation and to understand the impact of genetic variants on complex traits. Previous studies identified candidate CREs (cCREs) us
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ef37c806f6c18c3930749db34dc396f5
https://doi.org/10.1101/2023.04.02.535219
https://doi.org/10.1101/2023.04.02.535219
Autor:
Ross C. Hardison, Guanjue Xiang, Camden Jansen, Cheryl A. Keller, Belinda M. Giardine, April Cockburn, Xi He, Michael E. Sauria, Kathryn Weaver, Qunhua Li, Yu Zhang
Publikováno v:
The FASEB Journal. 36
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::87cc56a1311514de5027c602fe48696a
https://doi.org/10.1096/fasebj.2022.36.s1.r5637
https://doi.org/10.1096/fasebj.2022.36.s1.r5637
Autor:
Barbara J. Wold, Laurel A. Brandsmeier, Jeremy W. Prokop, Richard M. Myers, Shan Jiang, Mark Mackiewicz, Sarah Meadows, Ali Mortazavi, Camden Jansen, Eric M. Mendenhall, Daniel Savic, Ryne C. Ramaker, Candice J. Coppola, Andrew A. Hardigan, Surya B. Chhetri, Emma C. Dean, E. Christopher Partridge, Kimberly M. Newberry, C. Luke Messer, Say-Tar Goh
Publikováno v:
Nature
Transcription factors are DNA-binding proteins that have key roles in gene regulation1,2. Genome-wide occupancy maps of transcriptional regulators are important for understanding gene regulation and its effects on diverse biological processes3–6. H
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b7d5f9076268118a629be761d3d757e6
https://doi.org/10.1038/s41586-020-2023-4
https://doi.org/10.1038/s41586-020-2023-4
Autor:
Ira L. Blitz, Rebekah M. Charney, Margaret B. Fish, Camden Jansen, Kitt D. Paraiso, Jeff Jiajing Zhou, Aaron M. Zorn, Yuuri Yasuoka, Gert Jan C. Veenstra, Ali Mortazavi, M. Wlizla, Jin Sun Cho, Ann Rose Bright, Ken W.Y. Cho, Norihiro Sudou, Masanori Taira
Publikováno v:
Cell reports, vol 38, iss 7
Cell Reports, 38, 7, pp. 1-23
Cell Reports, 38, 1-23
Cell Reports, 38, 7, pp. 1-23
Cell Reports, 38, 1-23
SummaryMesendodermal specification is one of the earliest events in embryogenesis, where cells first acquire distinct identities. Cell differentiation is a highly regulated process that involves the function of numerous transcription factors (TFs) an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3c724bc6ffdb1da3af7e947d8305c88e
https://escholarship.org/uc/item/1ms272nq
https://escholarship.org/uc/item/1ms272nq
Autor:
Shimako Kawauchi, Marcelo A. Wood, Jonathan Neumann, Frank M. LaFerla, Grant R. MacGregor, Stefania Forner, Enikö A. Kramár, Camden Jansen, Edna E. Hingco, Dina P. Matheos, Joshua Andrei Alcantara, Kim N. Green, Andrea J. Tenner, Narges Rezaie, Ali Mortazavi, Gabriela Balderrama-Gutierrez, Kristine Minh Tran, David Baglietto-Vargas, Dominic I. Javonillo, Celia da Cunha, Jimmy Phan
Publikováno v:
Scientific Data
Scientific Data, Vol 8, Iss 1, Pp 1-16 (2021)
Scientific Data, Vol 8, Iss 1, Pp 1-16 (2021)
Mouse models of human diseases are invaluable tools for studying pathogenic mechanisms and testing interventions and therapeutics. For disorders such as Alzheimer’s disease in which numerous models are being generated, a challenging first step is t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f17a1cc34e84f6ed45e37ad845b3148d
http://europepmc.org/articles/PMC8519958
http://europepmc.org/articles/PMC8519958
Autor:
Kristine Minh Tran, Jimmy Phan, Joshua Andrei Alcantara, Grant R. Macgregor, Celia da Cunha, Andrea J. Tenner, Frank M. LaFerla, Dominic I. Javonillo, Dina P. Matheos, David Baglietto-Vargas, Camden Jansen, Jonathan Neumann, Narges Rezaie, Shimako Kawauchi, Gabriela Balderrama-Gutierrez, Kim N. Green, Ali Mortazavi, Edna E. Hingco, Marcelo A. Wood, Stefania Forner, Enikö A. Kramár
Animal models of disease are valuable resources for investigating pathogenic mechanisms and potential therapeutic interventions. However, for complex disorders such as Alzheimer’s disease (AD), the generation and availability of innumerous distinct
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::fcd2cfdd5050e1b890125eb78b6466db
https://doi.org/10.1101/2021.02.17.431716
https://doi.org/10.1101/2021.02.17.431716
Autor:
Katherine Williams, Elisabeth Rebboah, Carvalho K, Ali Mortazavi, Dowey A, Cassandra Joan McGill, Camden Jansen
SummaryGene regulatory networks (GRNs) provide a powerful framework for studying cellular differentiation. However, it is less clear how GRNs encode cellular responses to everyday microenvironmental cues. Macrophages can be polarized and potentially
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::648d0fa1e33c1169494c26ec9654ff95
https://doi.org/10.1101/2021.01.20.427499
https://doi.org/10.1101/2021.01.20.427499