StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain

Autor: Joanes Grandjean, Gabriel Desrosiers-Gregoire, Cynthia Anckaerts, Diego Angeles-Valdez, Fadi Ayad, David A Barrière, Ines Blockx, Aleksandra B Bortel, Margaret Broadwater, Beatriz M Cardoso, Marina Célestine, Jorge E Chavez-Negrete, Sangcheon Choi, Emma Christiaen, Perrin Clavijo, Luis Colon-Perez, Samuel Cramer, Tolomeo Daniele, Elaine Dempsey, Yujian Diao, Arno Doelemeyer, David Dopfel, Lenka Dvořáková, Claudia Falfán-Melgoza, Francisca F Fernandes, Caitlin F Fowler, Antonio Fuentes-Ibañez, Clément Garin, Eveline Gelderman, Carla EM Golden, Chao CG Guo, Marloes JAG Henckens, Lauren A Hennessy, Peter Herman, Nita Hofwijks, Corey Horien, Tudor M Ionescu, Jolyon Jones, Johannes Kaesser, Eugene Kim, Henriette Lambers, Alberto Lazari, Sung-Ho Lee, Amanda Lillywhite, Yikang Liu, Yanyan Y Liu, Alejandra López-Castro, Xavier López-Gil, Zilu Ma, Eilidh MacNicol, Dan Madularu, Francesca Mandino, Sabina Marciano, Matthew J McAuslan, Patrick McCunn, Alison McIntosh, Xianzong Meng, Lisa Meyer-Baese, Stephan Missault, Federico Moro, Daphne Naessens, Laura J Nava-Gomez, Hiroi Nonaka, Juan J Ortiz, Jaakko Paasonen, Lore M Peeters, Mickaël Pereira, Pablo D Perez, Marjory Pompilus, Malcolm Prior, Rustam Rakhmatullin, Henning M Reimann, Jonathan Reinwald, Rodrigo Triana de Rio, Alejandro Rivera-Olvera, Daniel Ruiz-Pérez, Gabriele Russo, Tobias J Rutten, Rie Ryoke, Markus Sack, Piergiorgio Salvan, Basavaraju G Sanganahalli, Aileen Schroeter, Bhedita J Seewoo, Erwan Selingue, Aline Seuwen, Bowen Shi, Nikoloz Sirmpilatze, Joanna AB Smith, Corrie Smith, Filip Sobczak, Petteri J Stenroos, Milou Straathof, Sandra Strobelt, Akira Sumiyoshi, Kengo Takahashi, Maria E Torres-García, Raul Tudela, Monica van den Berg, Kajo van der Marel, Aran TB van Hout, Roberta Vertullo, Benjamin Vidal, Roel M Vrooman, Victora X Wang, Isabel Wank, David JG Watson, Ting Yin, Yongzhi Zhang, Stefan Zurbruegg, Sophie Achard, Sarael Alcauter, Dorothee P Auer, Emmanuel L Barbier, Jürgen Baudewig, Christian F Beckmann, Nicolau Beckmann, Guillaume JPC Becq, Erwin LA Blezer, Radu Bolbos, Susann Boretius, Sandrine Bouvard, Eike Budinger, Joseph D Buxbaum, Diana Cash, Victoria Chapman, Kai-Hsiang Chuang, Luisa Ciobanu, Bram Coolen, Jeffrey W Dalley, Marc Dhenain, Rick M Dijkhuizen, Oscar Esteban, Cornelius Faber, Marcelo Febo, Kirk W Feindel, Gianluigi Forloni, Jérémie Fouquet, Eduardo A Garza-Villarreal, Natalia Gass, Jeffrey C Glennon, Alessandro Gozzi, Olli Gröhn, Andrew Harkin, Arend Heerschap, Xavier Helluy, Kristina Herfert, Arnd Heuser, Judith R Homberg, Danielle J Houwing, Fahmeed Hyder, Giovanna Diletta Ielacqua, Ileana O Jelescu, Heidi Johansen-Berg, Gen Kaneko, Ryuta Kawashima, Shella D Keilholz, Georgios A Keliris, Clare Kelly, Christian Kerskens, Jibran Y Khokhar, Peter C Kind, Jean-Baptiste Langlois, Jason P Lerch, Monica A López-Hidalgo, Denise Manahan-Vaughan, Fabien Marchand, Rogier B Mars, Gerardo Marsella, Edoardo Micotti, Emma Muñoz-Moreno, Jamie Near, Thoralf Niendorf, Willem M Otte, Patricia Pais, Wen-Ju Pan, Roberto A Prado-Alcalá, Gina L Quirarte, Jennifer Rodger, Tim Rosenow, Cassandra Sampaio Baptista, Alexander Sartorius, Stephen J Sawiak, Tom WJ Scheenen, Noam Shemesh, Yen-Yu Ian Shih, Amir Shmuel, Guadalupe Soria, Ron Stoop, Garth J Thompson, Sally M Till, Nick Todd, Annemie Van Der Linden, Annette van der Toorn, Geralda AF van Tilborg, Christian Vanhove, Andor Veltien, Marleen Verhoye, Lydia Wachsmuth, Wolfgang Weber-Fahr, Patricia Wenk, Xin Yu, Valerio Zerbi, Nanyin Zhang, Baogui B Zhang, Luc Zimmer, Gabriel A Devenyi, M Mallar Chakravarty, Andreas Hess

Task-free functional connectivity in animal models provides an experimental framework to examine connectivity phenomena under controlled conditions and allows comparison with invasive or terminal procedures. To date, animal acquisitions are performed

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::4d84c785310e2471901dd2bebabf2bb6
https://doi.org/10.1101/2022.04.27.489658

Longitudinal characterization of neuroanatomical changes in the Fischer 344 rat brain during normal aging and between sexes

Autor: M. Mallar Chakravarty, Jamie Near, Caitlin F Fowler, Gabriel A. Devenyi, Dan Madularu, Dana Goerzen

Animal models are widely used to study the pathophysiology of disease and to evaluate the efficacy of novel interventions, crucial steps towards improving disease outcomes in humans. The Fischer 344 (F344) wildtype rat is a common experimental backgr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::95b66ae7ee56acffba121d224fa7c9e8
https://doi.org/10.1101/2021.04.12.439510

Longitudinal Quantification of Metabolites and Macromolecules Reveals Age- and Sex-Related Changes in the Healthy Fischer 344 Rat Brain

Autor: Masoumeh Dehghani, Gabriel A. Devenyi, Caitlin F Fowler, Dan Madularu, Jamie Near

Normal aging is associated with numerous biological changes including altered brain metabolism and tissue chemistry. In vivo characterization of the neurochemical profile during aging is possible using magnetic resonance spectroscopy, a powerful non-

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2b1801e7728869b500a1c285fc42bb55
https://doi.org/10.1101/2020.04.29.069542

An MRI-Derived Neuroanatomical Atlas of the Fischer 344 Rat Brain

Autor: Caitlin F Fowler, Jürgen Germann, Dana Goerzen, Gabriel A. Devenyi, Dan Madularu, M. Mallar Chakravarty, Jamie Near

Publikováno v: Scientific Reports
Scientific Reports, Vol 10, Iss 1, Pp 1-13 (2020)

This paper reports the development of a high-resolution 3-D MRI atlas of the Fischer 344 adult rat brain. The atlas is a 60 μm isotropic image volume composed of 256 coronal slices with 71 manually delineated structures and substructures. The atlas

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f920eaac154be39014711d1e24171d3
https://doi.org/10.1101/743583