An integrated catalog of reference genes in the human gut microbiome

Autor: Li, Junhua, Jia, Huijue, Cai, Xianghang, Zhong, Huanzi, Feng, Qiang, Sunagawa, Shinichi, Arumugam, Manimozhiyan, Kultima, Jens Roat, Prifti, Edi, Nielsen, Trine, Juncker, Agnieszka Sierakowska, Manichanh, Chaysavanh, Chen, Bing, Zhang, Wenwei, Levenez, Florence, Wang, Juan, Xu, Xun, Xiao, Liang, Liang, Suisha, Zhang, Dongya, Zhang, Zhaoxi, Chen, Weineng, Zhao, Hailong, Al-Aama, Jumana Yousuf, Edris, Sherif, Yang, Huanming, Wang, Jian, Hansen, Torben, Nielsen, Henrik Bjørn, Brunak, Søren, Kristiansen, Karsten, Guarner, Francisco, Pedersen, Oluf, Dore, Joel, Ehrlich, Stanislav, Bork, Peer, Wang, Jun, Pons, Nicolas, Le Chatelier, Emmanuelle, Batto, Jean-Michel, Kennedy, Sean, Haimet, Florence, Winogradsky, Yohanan, Cultrone, Antonietta, Leclerc, Marion, Juste, Catherine, Guedon, Eric, Delorme, Christine, Layec, Séverine, Kaci, Ghalia, Van De Guchte, Maarten, Vandemeulebrouck, Gaetana, Jamet, Alexandre, Dervyn, Rozenn, Sanchez, Nicolas, Blottiere, Herve, Maguin, Emmanuelle, Renault, Pierre, Tap, Julien

Publikováno v: Nature Biotechnology
Nature Biotechnology, Nature Publishing Group, 2014, 32, pp.834-841. ⟨10.1038/nbt.2942⟩
Nature Biotechnology 32 (2014) 8
Nature Biotechnology, 32(8), 834-841

Many analyses of the human gut microbiome depend on a catalog of reference genes. Existing catalogs for the human gut microbiome are based on samples from single cohorts or on reference genomes or protein sequences, which limits coverage of global mi

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https://doi.org/10.1038/nbt.2942

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The influence of a short-term gluten-free diet on the human gut microbiome.

Autor: Bonder MJ; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands., Tigchelaar EF; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands.; Top Institute Food and Nutrition, Wageningen, The Netherlands., Cai X; BGI, Shenzhen, 518083, China., Trynka G; Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK., Cenit MC; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands., Hrdlickova B; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands., Zhong H; BGI, Shenzhen, 518083, China., Vatanen T; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA.; Department of Computer Science, Aalto University School of Science, Espoo, 02150, Finland., Gevers D; Broad Institute of MIT and Harvard, Cambridge, MA, 02142, USA., Wijmenga C; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands.; Top Institute Food and Nutrition, Wageningen, The Netherlands., Wang Y; BGI, Shenzhen, 518083, China., Zhernakova A; Department of Genetics, University of Groningen, University Medical Centre Groningen, Groningen, The Netherlands. sashazhernakova@gmail.com.; Top Institute Food and Nutrition, Wageningen, The Netherlands. sashazhernakova@gmail.com.

Publikováno v: Genome medicine [Genome Med] 2016 Apr 21; Vol. 8 (1), pp. 45. Date of Electronic Publication: 2016 Apr 21.