Zobrazeno 1 - 10
of 227
pro vyhledávání: '"C. Roosens"'
Autor:
Alexander Van Uffelen, Andrés Posadas, Nancy H. C. Roosens, Kathleen Marchal, Sigrid C. J. De Keersmaecker, Kevin Vanneste
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-17 (2024)
Abstract Taxonomic classification is crucial in identifying organisms within diverse microbial communities when using metagenomics shotgun sequencing. While second-generation Illumina sequencing still dominates, third-generation nanopore sequencing p
Externí odkaz:
https://doaj.org/article/8ccd90fca50845a085abc20f6ce9652c
Autor:
Florence E. Buytaers, Nicolas Berger, Johan Van der Heyden, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker
Publikováno v:
Frontiers in Public Health, Vol 12 (2024)
The key role of our microbiome in influencing our health status, and its relationship with our environment and lifestyle or health behaviors, have been shown in the last decades. Therefore, the human microbiome has the potential to act as a biomarker
Externí odkaz:
https://doaj.org/article/a961249cca114af895ba045f7f4041e3
Autor:
Charlotte Moens, Bert Bogaerts, Victor Lorente-Leal, Kevin Vanneste, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Laurent Mostin, David Fretin, Sylvie Marché
Publikováno v:
Frontiers in Veterinary Science, Vol 11 (2024)
In recent years, there has been an increase in the number of reported cases of Mycobacterium microti infection in various animals, which can interfere with the ante-mortem diagnosis of animal tuberculosis caused by Mycobacterium bovis. In this study,
Externí odkaz:
https://doaj.org/article/f8a6a00134c941968d7d75d3f1491f00
Autor:
Florence E. Buytaers, Bavo Verhaegen, Tom Van Nieuwenhuysen, Nancy H. C. Roosens, Kevin Vanneste, Kathleen Marchal, Sigrid C. J. De Keersmaecker
Publikováno v:
Frontiers in Microbiology, Vol 15 (2024)
IntroductionShotgun metagenomics has previously proven effective in the investigation of foodborne outbreaks by providing rapid and comprehensive insights into the microbial contaminant. However, culture enrichment of the sample has remained a prereq
Externí odkaz:
https://doaj.org/article/94977bc403b44897aa754cfb0f9d4a5e
Autor:
Bram Bloemen, Mathieu Gand, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker
Publikováno v:
Scientific Reports, Vol 13, Iss 1, Pp 1-14 (2023)
Abstract Rapid, accurate and comprehensive diagnostics are essential for outbreak prevention and pathogen surveillance. Real-time, on-site metagenomics on miniaturized devices, such as Oxford Nanopore Technologies MinION sequencing, could provide a p
Externí odkaz:
https://doaj.org/article/75773943cef646afa053c8ee3df16bde
Autor:
Mathieu Gand, Bram Bloemen, Kevin Vanneste, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-14 (2023)
Abstract Background Oxford Nanopore Technologies (ONT) offers an accessible platform for long-read sequencing, which improves the reconstruction of genomes and helps to resolve complex genomic contexts, especially in the case of metagenome analysis.
Externí odkaz:
https://doaj.org/article/1d2b147d55f2412e970b13798014f108
Autor:
Laura A. E. Van Poelvoorde, François E. Dufrasne, Steven Van Gucht, Xavier Saelens, Nancy H. C. Roosens
Publikováno v:
Current Issues in Molecular Biology, Vol 45, Iss 3, Pp 2521-2532 (2023)
The monitoring of antiviral-resistant influenza virus strains is important for public health given the availability and use of neuraminidase inhibitors and other antivirals to treat infected patients. Naturally occurring oseltamivir-resistant seasona
Externí odkaz:
https://doaj.org/article/e162da85f40146f69fbd8611be5ba64b
Autor:
Stéphanie Nouws, Bavo Verhaegen, Sarah Denayer, Florence Crombé, Denis Piérard, Bert Bogaerts, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
IntroductionShiga toxin-producing Escherichia coli (STEC) is a gastrointestinal pathogen causing foodborne outbreaks. Whole Genome Sequencing (WGS) in STEC surveillance holds promise in outbreak prevention and confinement, in broadening STEC epidemio
Externí odkaz:
https://doaj.org/article/125afbce455143c1966d3be757d4ebe1
Autor:
Bert Bogaerts, Marie-Alice Fraiture, Astrid Huwaert, Tom Van Nieuwenhuysen, Bram Jacobs, Koenraad Van Hoorde, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kevin Vanneste
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
Bacillus cereus is a spore-forming bacterium that occurs as a contaminant in food and feed, occasionally resulting in food poisoning through the production of various toxins. In this study, we retrospectively characterized viable B. cereus sensu lato
Externí odkaz:
https://doaj.org/article/38c8d541ad064e1080a62609f69a0ba6
Publikováno v:
Fermentation, Vol 9, Iss 11, p 926 (2023)
Recently, a genetically modified microorganism (GMM) detection strategy using real-time PCR technology was developed to control fermentation products commercialized in the food and feed chain, allowing several unexpected GMM contaminations to be high
Externí odkaz:
https://doaj.org/article/fb118a7a44cf4d5ca60a8af3ef9c385c