Models of classroom assessment for course-based research experiences

Autor: David I. Hanauer, Tong Zhang, Mark J. Graham, Sandra D. Adams, Yesmi Patricia Ahumada-Santos, Richard M. Alvey, Mauricio S. Antunes, Mary A. Ayuk, María Elena Báez-Flores, Christa T. Bancroft, Tonya C. Bates, Meghan J. Bechman, Elizabeth Behr, Andrea R. Beyer, Rebecca L. Bortz, Dane M. Bowder, Laura A. Briggs, Victoria Brown-Kennerly, Michael A. Buckholt, Sharon K. Bullock, Kristen A. Butela, Christine A. Byrum, Steven M. Caruso, Catherine P. Chia, Rebecca A. Chong, Hui-Min Chung, Kari L. Clase, Sean T. Coleman, D. Parks Collins, Stephanie B. Conant, Brett M. Condon, Pamela L. Connerly, Bernadette J. Connors, Jennifer E. Cook-Easterwood, Katie E. Crump, Tom D’Elia, Megan K. Dennis, Linda C. DeVeaux, Lautaro Diacovich, Iain Duffy, Nicholas P. Edgington, Dustin C. Edwards, Tenny O. G. Egwuatu, Elvira R. Eivazova, Patricia C. Fallest-Strobl, Christy L. Fillman, Ann M. Findley, Emily Fisher, Matthew R. Fisher, Marie P. Fogarty, Amanda C. Freise, Victoria J. Frost, Maria D. Gainey, Amaya M. Garcia Costas, Atenea A. Garza, Hannah E. Gavin, Raffaella Ghittoni, Bryan Gibb, Urszula P. Golebiewska, Anna S. Grinath, Susan M. R. Gurney, Rebekah F. Hare, Steven G. Heninger, John M. Hinz, Lee E. Hughes, Pradeepa Jayachandran, Kristen C. Johnson, Allison A. Johnson, Michelle Kanther, Margaret Kenna, Bridgette L. Kirkpatrick, Karen K. Klyczek, Kathryn P. Kohl, Michael Kuchka, Amber J. LaPeruta, Julia Y. Lee-Soety, Lynn O. Lewis, Heather M. Lindberg, Jaclyn A. Madden, Sergei A. Markov, Matthew D. Mastropaolo, Vinayak Mathur, Sean P. McClory, Evan C. Merkhofer, Julie A. Merkle, Scott F. Michael, Jon C. Mitchell, Sally D. Molloy, Denise L. Monti, María Alejandra Mussi, Holly Nance, Fernando E. Nieto-Fernandez, Jillian C. Nissen, Imade Y. Nsa, Mary G. O’Donnell, Shallee T. Page, Andrea Panagakis, Jesús Ricardo Parra-Unda, Tara A. Pelletier, Tiara G. Perez Morales, Nick T. Peters, Vipaporn Phuntumart, Richard S. Pollenz, Mary L. Preuss, David P. Puthoff, Muideen K. Raifu, Nathan S. Reyna, Claire A. Rinehart, Jessica M. Rocheleau, Ombeline Rossier, Adam D. Rudner, Elizabeth E. Rueschhoff, Amy Ryan, Sanghamitra Saha, Christopher D. Shaffer, Mary Ann V. Smith, Amy B. Sprenkle, Christy L. Strong, C. Nicole Sunnen, Brian P. Tarbox, Louise Temple, Kara R. Thoemke, Michael A. Thomas, Deborah M. Tobiason, Sara S. Tolsma, Julie Torruellas Garcia, Megan S. Valentine, Edwin Vazquez, Robert E. Ward, Catherine M. Ward, Vassie C. Ware, Marcie H. Warner, Jacqueline M. Washington, Daniel E. Westholm, Keith A. Wheaton, Beth M. Wilkes, Elizabeth C. Williams, William H. Biederman, Steven G. Cresawn, Danielle M. Heller, Deborah Jacobs-Sera, Graham F. Hatfull, David J. Asai, Viknesh Sivanathan

Publikováno v: Frontiers in Education, Vol 8 (2023)

Course-based research pedagogy involves positioning students as contributors to authentic research projects as part of an engaging educational experience that promotes their learning and persistence in science. To develop a model for assessing and gr

Externí odkaz: https://doaj.org/article/dbc6c31976584d29ae88631edf9ca15d

Novel Cluster AZ Arthrobacter phages Powerpuff, Lego, and YesChef exhibit close functional relationships with Microbacterium phages.

Autor: Andrew Kapinos, Pauline Aghamalian, Erika Capehart, Anya Alag, Heather Angel, Eddie Briseno, Byron Corado Perez, Emily Farag, Hilory Foster, Abbas Hakim, Daisy Hernandez-Casas, Calvin Huang, Derek Lam, Maya Mendez, Ashley Min, Nikki Nguyen, Alexa L Omholt, Emily Ortiz, Lizbeth Shelly Saldivar, Jack Arthur Shannon, Rachel Smith, Mihika V Sridhar, An Ta, Malavika C Theophilus, Ryan Ngo, Canela Torres, Krisanavane Reddi, Amanda C Freise, Jordan Moberg Parker

Publikováno v: PLoS ONE, Vol 17, Iss 1, p e0262556 (2022)

Bacteriophages exhibit a vast spectrum of relatedness and there is increasing evidence of close genomic relationships independent of host genus. The variability in phage similarity at the nucleotide, amino acid, and gene content levels confounds atte

Externí odkaz: https://doaj.org/article/bcc2babaff9a4452bceb0b36016c900f

PUMAA: A Platform for Accessible Microbiome Analysis in the Undergraduate Classroom

Autor: Keith Mitchell, Jiem Ronas, Christopher Dao, Amanda C. Freise, Serghei Mangul, Casey Shapiro, Jordan Moberg Parker

Publikováno v: Frontiers in Microbiology, Vol 11 (2020)

Improvements in high-throughput sequencing makes targeted amplicon analysis an ideal method for the study of human and environmental microbiomes by undergraduates. Multiple bioinformatics programs are available to process and interpret raw microbial

Externí odkaz: https://doaj.org/article/38617cfcf1614bcd902d54e31af06478

ranacapa: An R package and Shiny web app to explore environmental DNA data with exploratory statistics and interactive visualizations [version 1; referees: 1 approved, 2 approved with reservations]

Autor: Gaurav S. Kandlikar, Zachary J. Gold, Madeline C. Cowen, Rachel S. Meyer, Amanda C. Freise, Nathan J.B. Kraft, Jordan Moberg-Parker, Joshua Sprague, David J. Kushner, Emily E. Curd

Publikováno v: F1000Research, Vol 7 (2018)

Environmental DNA (eDNA) metabarcoding is becoming a core tool in ecology and conservation biology, and is being used in a growing number of education, biodiversity monitoring, and public outreach programs in which professional research scientists en

Externí odkaz: https://doaj.org/article/16c72b067e8543a192dc05adbf29b006

The CALeDNA program: Citizen scientists and researchers inventory California's biodiversity

Autor: Gaurav S. Kandlikar, Lenore Pipes, Tiara Moore, Jason P. Sexton, Emily E. Curd, Kimberly M. Ballare, Harris A. Lewin, N. Dean Pentcheff, Beth Shapiro, Teia M. Schweizer, Adam Wall, Jordan Moberg Parker, Robert K. Wayne, Sabrina Shirazi, Nathan J. B. Kraft, Emma L. Aronson, Regina Wetzer, Chloe Orland, Amanda C. Freise, Miroslava N. Munguia Ramos, Jeffrey D. Wall, Maura Palacios Mejia, Paul H. Barber, Zachary Gold, Anna Worth, Ana E. Garcia-Vedrenne, Rachel S. Meyer, Meixi Lin, Rasmus Nielsen, Dannise Ruiz Ramos, Eric Beraut, Wai-Yin Kwan

Publikováno v: California Agriculture, Vol 75, Iss 01, Pp 20-32 (2021)

Climate change is leading to habitat shifts that threaten species persistence throughout California's unique ecosystems. Baseline biodiversity data would provide opportunities for habitats to be managed under short-term and long-term environmental ch

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9645d2b590c9cbf620b7ded584445ffd
https://doi.org/10.3733/ca.2021a0001