Zobrazeno 1 - 10
of 83
pro vyhledávání: '"C Roulin"'
Publikováno v:
eLife, Vol 12 (2024)
Understanding how plants adapt to changing environments and the potential contribution of transposable elements (TEs) to this process is a key question in evolutionary genomics. While TEs have recently been put forward as active players in the contex
Externí odkaz:
https://doaj.org/article/3856219ea0f540bdb30f2758b54ec73d
Autor:
Michael Thieme, Nikolaos Minadakis, Christophe Himber, Bettina Keller, Wenbo Xu, Kinga Rutowicz, Calvin Matteoli, Marcel Böhrer, Bart Rymen, Debbie Laudencia-Chingcuanco, John P Vogel, Richard Sibout, Christoph Stritt, Todd Blevins, Anne C Roulin
Publikováno v:
PLoS Genetics, Vol 20, Iss 3, p e1011200 (2024)
Long terminal repeat retrotransposons (LTR-RTs) are powerful mutagens regarded as a major source of genetic novelty and important drivers of evolution. Yet, the uncontrolled and potentially selfish proliferation of LTR-RTs can lead to deleterious mut
Externí odkaz:
https://doaj.org/article/bc652c54dc5f456d8ef95e752f2589c8
Autor:
Michael Abrouk, Naveenkumar Athiyannan, Thomas Müller, Yveline Pailles, Christoph Stritt, Anne C. Roulin, Chenggen Chu, Shuyu Liu, Takumi Morita, Hirokazu Handa, Jesse Poland, Beat Keller, Simon G. Krattinger
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-11 (2021)
Krattinger, Abrouk et al. use genome wide association study and haplotype analyses to investigate the genetics of glume colour in ten reference grade wheat genomes. Haplotype comparison identifies a MYB transcription factor as a candidate gene for re
Externí odkaz:
https://doaj.org/article/badc5c24b31646fd94b95acf706411c2
Autor:
Sean P. Gordon, Bruno Contreras-Moreira, Daniel P. Woods, David L. Des Marais, Diane Burgess, Shengqiang Shu, Christoph Stritt, Anne C. Roulin, Wendy Schackwitz, Ludmila Tyler, Joel Martin, Anna Lipzen, Niklas Dochy, Jeremy Phillips, Kerrie Barry, Koen Geuten, Hikmet Budak, Thomas E. Juenger, Richard Amasino, Ana L. Caicedo, David Goodstein, Patrick Davidson, Luis A. J. Mur, Melania Figueroa, Michael Freeling, Pilar Catalan, John P. Vogel
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-13 (2017)
The role of differential gene content in the evolution and function of eukaryotic genomes remains poorly explored. Here the authors assemble and annotate the Brachypodium distachyon pan-genome consisting of 54 diverse lines and reveal the differentia
Externí odkaz:
https://doaj.org/article/2fe896100a29439d86bdde8e91d1a8f2
Autor:
Rebecca Leber, Matthias Heuberger, Victoria Widrig, Esther Jung, Etienne Paux, Anne C. Roulin, Beat Keller, Javier Sánchez-Martín
Wheat breeding for disease resistance relies on the availability and use of diverse genetic resources. More than 800,000 wheat accessions are globally conserved in gene banks, but they are mostly uncharacterized for the presence of resistance genes a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1b5684f6703768d78e5f09f333805767
https://doi.org/10.1101/2023.03.23.533900
https://doi.org/10.1101/2023.03.23.533900
Autor:
Aleksandra Skalska, Christoph Stritt, Michele Wyler, Hefin W. Williams, Martin Vickers, Jiwan Han, Metin Tuna, Gulsemin Savas Tuna, Karolina Susek, Martin Swain, Rafał K. Wóycicki, Saurabh Chaudhary, Fiona Corke, John H. Doonan, Anne C. Roulin, Robert Hasterok, Luis A. J. Mur
Publikováno v:
International Journal of Molecular Sciences, Vol 21, Iss 18, p 6700 (2020)
Brachypodium distachyon (Brachypodium) is a non-domesticated model grass species that can be used to test if variation in genetic sequence or methylation are linked to environmental differences. To assess this, we collected seeds from 12 sites within
Externí odkaz:
https://doaj.org/article/32e567e53e9f4103a738b318319771ae
Autor:
Robert Hasterok, Pilar Catalan, Samuel P. Hazen, Anne C. Roulin, John P. Vogel, Kai Wang, Luis A.J. Mur
Publikováno v:
Trends in Plant Science. 28:252-253
Publikováno v:
American Journal of Botany. 108:1310-1314
Transposable elements (TEs) in plants are best known for their ability to inflate genome size and their potential effects on host phenotypes. In this essay, we suggest that many TEs do none of these things, but survive and replicate inconspicuously i
In plants, the transcriptional and post-transcriptional repression of TEs involved the production of small interfering RNAs (siRNAs) that guide the de novo methylation and transcriptional silencing of TEs. Because siRNAs act via sequence complementar
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::79f1eddde8d832dcf3defc33d521e89c
https://doi.org/10.1101/2022.04.05.487121
https://doi.org/10.1101/2022.04.05.487121
Autor:
Takumi Morita, Shuyu Liu, Anne C. Roulin, Chenggen Chu, Simon G. Krattinger, Beat Keller, Hirokazu Handa, Michael Abrouk, Jesse Poland, Naveenkumar Athiyannan, Yveline Pailles, Thomas Müller, Christoph Stritt
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-11 (2021)
Communications Biology
Communications Biology
The cloning of agriculturally important genes is often complicated by haplotype variation across crop cultivars. Access to pan-genome information greatly facilitates the assessment of structural variations and rapid candidate gene identification. Her