Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background

Autor: Delphine Lallias, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, Laurent Labbé, Lionel Goardon, Jean-Michel Le Calvez, Marjorie Bideau, Alexandre Fricot, Audrey Prézelin, Mathieu Charles, Marco Moroldo, Xavier Cousin, Olivier Bouchez, Alain Roulet, Edwige Quillet, Mathilde Dupont-Nivet

Publikováno v: Epigenetics, Vol 16, Iss 9, Pp 1031-1052 (2021)

Phenotypic plasticity is a key component of the ability of organisms to respond to changing environmental conditions. In this study, we aimed to study the establishment of DNA methylation marks in response to an environmental stress in rainbow trout

Externí odkaz: https://doaj.org/article/4be0108cff1843efb18489af01bf42ad

Genetic and transcriptomic analyses provide new insights on the early antiviral response to VHSV in resistant and susceptible rainbow trout

Autor: Eloi R. Verrier, Carine Genet, Denis Laloë, Florence Jaffrezic, Andrea Rau, Diane Esquerre, Nicolas Dechamp, Céline Ciobotaru, Caroline Hervet, Francine Krieg, Luc Jouneau, Christophe Klopp, Edwige Quillet, Pierre Boudinot

Publikováno v: BMC Genomics, Vol 19, Iss 1, Pp 1-15 (2018)

Abstract Background The viral hemorrhagic septicemia virus (VHSV) is a major threat for salmonid farming and for wild fish populations worldwide. Previous studies have highlighted the importance of innate factors regulated by a major quantitative tra

Externí odkaz: https://doaj.org/article/bd66f02a107f4020b116b0d576eb583d

Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing

Autor: Charles Poncet, Florent Petitprez, Maria Bernard, Edwige Quillet, Chris Hoze, Nicolas Dechamp, Philippe Hocdé, Anastasia Bestin, Céline Ciobotaru, Yann Guiguen, Pierrick Haffray, Marine Milhes, Florence Phocas, Olivier Bouchez, Jérôme Lluch, Clémence Fraslin, Mathieu Charles, Francine Krieg

Publikováno v: Scientific Reports
Scientific Reports, 2020, 10, pp.1-13. ⟨10.1038/s41598-020-74757-8⟩
Scientific Reports, Vol 10, Iss 1, Pp 1-13 (2020)
Scientific Reports, Nature Publishing Group, 2020, 10, pp.1-13. ⟨10.1038/s41598-020-74757-8⟩
Fraslin, C, Phocas, F, Bestin, A, Charles, M, Bernard, M, Krieg, F, Dechamp, N, Ciobotaru, C, Hozé, C, Petitprez, F, Milhes, M, Lluch, J, Bouchez, O, Poncet, C, Hocdé, P, Haffray, P, Guiguen, Y & Quillet, E 2020, ' Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing ', Scientific Reports . https://doi.org/10.1038/s41598-020-74757-8

Rainbow trout has a male heterogametic (XY) sex determination system controlled by a major sex-determining gene, sdY. Unexpectedly, a few phenotypically masculinised fish are regularly observed in all-female farmed trout stocks. To better understand

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::64ab230d6a3352dcb76c5069c9c070e9
https://hal.inrae.fr/hal-03026383/document

Analysis of genomewide patterns of DNA methylation in response to an early temperature stress in rainbow trout

Autor: Delphine Lallias, Edwige Quillet, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, Jean-Michel Le Calvez, Marjorie Bideau, Lionel Goardon, Laurent Labbé, Mathilde Dupont-Nivet

Publikováno v: Aquaculture Europe 2019
Aquaculture Europe 2019, Oct 2019, Berlin, Germany
HAL

International audience

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::1fb62173d5374d2d5a60e220e0261c7e
https://hal.inrae.fr/hal-02950585/document

Identification de gènes différentiellement exprimés dans deux tissus cibles de lignées clonales de truite sensibles ou résistantes à la SHV

Autor: Carine Genet, Verrier, E. R., Céline Ciobotaru, Christophe Klopp, Diane Esquerre, Denis Laloë, Pierre Boudinot, Edwige Quillet

Publikováno v: Séminaire du Département de Génétique animale
Séminaire du Département de Génétique animale, Apr 2014, Fréjus, France. 1 p
Séminaire du Département de Génétique animale, Fréjus, FRA, 2014-04-07-2014-07-10
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absent

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::ef5abf656be6e588794f3d563f7eb759
https://hal.science/hal-01193891/document