Zobrazeno 1 - 10
of 2 276
pro vyhledávání: '"C, Hicks"'
Autor:
Carrie Wright, Qier Meng, Michael R. Breshock, Lyla Atta, Margaret A. Taub, Leah R. Jager, John Muschelli, Stephanie C. Hicks
Publikováno v:
Journal of Statistics and Data Science Education, Vol 32, Iss 4, Pp 331-344 (2024)
With unprecedented and growing interest in data science education, there are limited educator materials that provide meaningful opportunities for learners to practice statistical thinking, as defined by Wild and Pfannkuch, with messy data addressing
Externí odkaz:
https://doaj.org/article/18a4cc5a04f84d3ea84a0a06222a2ced
Autor:
Robert W. Perry, Benjamin H. Mullish, James L. Alexander, Raashi Shah, Nathan P. Danckert, Jesus Miguens Blanco, Lauren Roberts, Zhigang Liu, Despoina Chrysostomou, Shiva T. Radhakrishnan, Sharmili Balarajah, Rachael Barry, Lucy C. Hicks, Horace R. T. Williams, Julian R. Marchesi
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-7 (2024)
Abstract Investigating the gut microbiome and metabolome frequently requires faecal samples, which can be difficult to obtain. Previous studies have shown that rectal swabs are comparable to faecal samples for analysing gut microbiota composition and
Externí odkaz:
https://doaj.org/article/2884c53508e64f8f9e17d15c3f4d832c
Autor:
Mark Hamilton, Eva Maire, Charlotte Monteil, Vainehu Vane, Nicholas A. J. Graham, Victor Brun, James P. W. Robinson, Joachim Claudet, Valeriano Parravicini, Christina C. Hicks
Publikováno v:
Ecosystems and People, Vol 20, Iss 1 (2024)
ABSTRACTSmall-scale fisheries provide nutrients to hundreds of millions of people worldwide, with yields dependent on the condition of marine habitats such as coral reefs. Small-scale fisheries are a particularly important food source in societies wi
Externí odkaz:
https://doaj.org/article/3207c32fbe3c413588f4e50bb32a9389
Autor:
Carlos A. Ruiz-Perez, Prachi Nakashe, Maggie A. Marshall, Francesco Marass, Tuong Tang, Lisa M. McLennan, Marissa Kroll, Brian K. Flesner, Suzanne Gray, Jill M. Rafalko, Daniel S. Grosu, Susan C. Hicks, John A. Tynan, Dana W.Y. Tsui, Andi Flory, Kristina M. Kruglyak
Publikováno v:
Frontiers in Veterinary Science, Vol 11 (2024)
This proof-of-concept evaluation demonstrates that next-generation sequencing-based liquid biopsy can detect genomic alterations in the blood of cats with cancer and the absence of such alterations in the blood of presumably cancer-free cats. Two cat
Externí odkaz:
https://doaj.org/article/574a27c2e3a84f46ba3a5b5f33382d63
Autor:
Sean K. Maden, Sang Ho Kwon, Louise A. Huuki-Myers, Leonardo Collado-Torres, Stephanie C. Hicks, Kristen R. Maynard
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-26 (2023)
Abstract Deconvolution of cell mixtures in “bulk” transcriptomic samples from homogenate human tissue is important for understanding disease pathologies. However, several experimental and computational challenges impede transcriptomics-based deco
Externí odkaz:
https://doaj.org/article/934d17d7f4b148708efb8c0435e4ba59
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-21 (2023)
Abstract Pseudotime analysis with single-cell RNA-sequencing (scRNA-seq) data has been widely used to study dynamic gene regulatory programs along continuous biological processes. While many methods have been developed to infer the pseudotemporal tra
Externí odkaz:
https://doaj.org/article/16c2bac5be1b45d4a1d754a571ed624c
Autor:
Louise A. Huuki-Myers, Kelsey D. Montgomery, Sang Ho Kwon, Stephanie C. Page, Stephanie C. Hicks, Kristen R. Maynard, Leonardo Collado-Torres
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-21 (2023)
Abstract We define and identify a new class of control genes for next-generation sequencing called total RNA expression genes (TREGs), which correlate with total RNA abundance in cell types of different sizes and transcriptional activity. We provide
Externí odkaz:
https://doaj.org/article/461899ba8b9642eaaa65922cbc7e25e9
Autor:
Ariel A. Hippen, Dalia K. Omran, Lukas M. Weber, Euihye Jung, Ronny Drapkin, Jennifer A. Doherty, Stephanie C. Hicks, Casey S. Greene
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-27 (2023)
Abstract Background Single-cell gene expression profiling provides unique opportunities to understand tumor heterogeneity and the tumor microenvironment. Because of cost and feasibility, profiling bulk tumors remains the primary population-scale anal
Externí odkaz:
https://doaj.org/article/0091f1d2fe894823bbb230a110d2d561
Autor:
Lora E. Fleming, Philip J. Landrigan, Oliver S. Ashford, Ella M. Whitman, Amy Swift, William H. Gerwick, Johanna J. Heymans, Christina C. Hicks, Karyn Morrissey, Mathew P. White, Lota Alcantara-Creencia, Karen A. Alexander, Thomas Astell-Burt, Roberto G. S. Berlinck, Philippa J. Cohen, Richard Hixson, Mohammad Mahmudul Islam, Arihiro Iwasaki, Radisti A. Praptiwi, Hervé Raps, Jan Yves Remy, Georgina Sowman, Eva Ternon, Torsten Thiele, Shakuntala H. Thilsted, Jacqueline Uku, Stephanie Ockenden, Pushpam Kumar
Publikováno v:
Annals of Global Health, Vol 90, Iss 1, Pp 41-41 (2024)
A healthy ocean is essential for human health, and yet the links between the ocean and human health are often overlooked. By providing new medicines, technologies, energy, foods, recreation, and inspiration, the ocean has the potential to enhance hum
Externí odkaz:
https://doaj.org/article/168412b34dda4fdf822746ce4a0f8f78
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-12 (2023)
Abstract Feature selection to identify spatially variable genes or other biologically informative genes is a key step during analyses of spatially-resolved transcriptomics data. Here, we propose nnSVG, a scalable approach to identify spatially variab
Externí odkaz:
https://doaj.org/article/9f82e351a422401083590e8ca63707fe