Host ZCCHC3 blocks HIV-1 infection and production through a dual mechanism.

Autor: Yi B; Graduate School of Biostudies, Kyoto University, Yoshida-Konoe-Cho, Sakyo-ku, Kyoto 606-8501, Japan., Tanaka YL; Department of Veterinary Medicine, Faculty of Agriculture, University of Miyazaki, 1-1 Gakuen Kibanadai-nishi, Miyazaki, Miyazaki 889-2192, Japan., Cornish D; Division of Infectious Diseases, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.; Center for Pathogen Genomics and Microbial Evolution, Northwestern University Havey Institute for Global Health, Chicago, IL 60611, USA., Kosako H; Division of Cell Signaling, Fujii Memorial Institute of Medical Sciences, Institute of Advanced Medical Sciences, Tokushima University, 3-18-15 Kuramoto-cho, Tokushima 770-8503, Japan., Butlertanaka EP; Department of Veterinary Medicine, Faculty of Agriculture, University of Miyazaki, 1-1 Gakuen Kibanadai-nishi, Miyazaki, Miyazaki 889-2192, Japan., Sengupta P; Howard Hughes Medical Institute, Janelia Research Campus, 19700 Helix Drive, Ashburn, VA 20147, USA., Lippincott-Schwartz J; Howard Hughes Medical Institute, Janelia Research Campus, 19700 Helix Drive, Ashburn, VA 20147, USA., Hultquist JF; Division of Infectious Diseases, Northwestern University Feinberg School of Medicine, Chicago, IL 60611, USA.; Center for Pathogen Genomics and Microbial Evolution, Northwestern University Havey Institute for Global Health, Chicago, IL 60611, USA., Saito A; Department of Veterinary Medicine, Faculty of Agriculture, University of Miyazaki, 1-1 Gakuen Kibanadai-nishi, Miyazaki, Miyazaki 889-2192, Japan.; Center for Animal Disease Control, University of Miyazaki, 1-1 Gakuen Kibanadai-nishi, Miyazaki, Miyazaki 889-2192, Japan.; Graduate School of Medicine and Veterinary Medicine, University of Miyazaki, 5200 Kiyotakecho Kihara, Miyazaki, Miyazaki 889-1692, Japan., Yoshimura SH; Graduate School of Biostudies, Kyoto University, Yoshida-Konoe-Cho, Sakyo-ku, Kyoto 606-8501, Japan.; Center for Living Systems Information Science (CeLiSIS), Kyoto University, Yoshida-Konoe-Cho, Sakyo-ku, Kyoto 606-8501, Japan.

Publikováno v: IScience [iScience] 2024 Feb 05; Vol. 27 (3), pp. 109107. Date of Electronic Publication: 2024 Feb 05 (Print Publication: 2024).

The SARS-CoV-2 spike S375F mutation characterizes the Omicron BA.1 variant.

Autor: Kimura I; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan., Yamasoba D; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; Faculty of Medicine, Kobe University, Kobe 6500017, Japan., Nasser H; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan.; Department of Clinical Pathology, Faculty of Medicine, Suez Canal University, Ismailia 41511, Egypt., Zahradnik J; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel., Kosugi Y; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; Graduate School of Medicine, the University of Tokyo, Tokyo 1130033, Japan., Wu J; Department of Molecular Life Science, Tokai University School of Medicine, Isehara 2591193, Japan.; CREST, Japan Science and Technology Agency, Kawaguchi 3220012, Japan., Nagata K; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Uriu K; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; Graduate School of Medicine, the University of Tokyo, Tokyo 1130033, Japan., Tanaka YL; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan., Ito J; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan., Shimizu R; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan., Tan TS; Division of Infection and Immunity, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan., Butlertanaka EP; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan., Asakura H; Tokyo Metropolitan Institute of Public Health, Tokyo 1690073, Japan., Sadamasu K; Tokyo Metropolitan Institute of Public Health, Tokyo 1690073, Japan., Yoshimura K; Tokyo Metropolitan Institute of Public Health, Tokyo 1690073, Japan., Ueno T; Division of Infection and Immunity, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan., Takaori-Kondo A; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Schreiber G; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel., Toyoda M; Division of Infection and Immunity, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan., Shirakawa K; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Irie T; Institute of Biomedical and Health Sciences, Hiroshima University, Hiroshima 7398511, Japan., Saito A; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan.; Center for Animal Disease Control, University of Miyazaki, Miyazaki 8892192, Japan.; Graduate School of Medicine and Veterinary Medicine, University of Miyazaki, Miyazaki 8891692, Japan., Nakagawa S; Department of Molecular Life Science, Tokai University School of Medicine, Isehara 2591193, Japan.; CREST, Japan Science and Technology Agency, Kawaguchi 3220012, Japan., Ikeda T; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan., Sato K; Division of Systems Virology, Department of Microbiology and Immunology, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; Graduate School of Medicine, the University of Tokyo, Tokyo 1130033, Japan.; CREST, Japan Science and Technology Agency, Kawaguchi 3220012, Japan.; International Research Center for Infectious Diseases, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; International Vaccine Design Center, the Institute of Medical Science, the University of Tokyo, Tokyo 1088639, Japan.; Graduate School of Frontier Sciences, the University of Tokyo, Kashiwa 2778561, Japan.; Collaboration Unit for Infection, Joint Research Center for Human Retrovirus Infection, Kumamoto University, Kumamoto 8600811, Japan.

Publikováno v: IScience [iScience] 2022 Dec 22; Vol. 25 (12), pp. 105720. Date of Electronic Publication: 2022 Dec 05.

Virological characteristics of the SARS-CoV-2 Omicron BA.2 spike.

Autor: Yamasoba D; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Faculty of Medicine, Kobe University, Kobe, Japan., Kimura I; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan., Nasser H; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan; Department of Clinical Pathology, Faculty of Medicine, Suez Canal University, Ismailia, Egypt., Morioka Y; Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan., Nao N; Division of International Research Promotion, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; One Health Research Center, Hokkaido University, Sapporo, Japan., Ito J; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan., Uriu K; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Graduate School of Medicine, The University of Tokyo, Tokyo, Japan., Tsuda M; Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan; Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan., Zahradnik J; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel., Shirakawa K; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto, Japan., Suzuki R; Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan., Kishimoto M; Division of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Kosugi Y; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Laboratory of Systems Virology, Institute for Frontier Life and Medical Sciences, Kyoto University, Kyoto, Japan; Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto, Japan., Kobiyama K; Division of Vaccine Science, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan., Hara T; Division of Vaccine Science, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan., Toyoda M; Division of Infection and immunity, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan., Tanaka YL; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan., Butlertanaka EP; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan., Shimizu R; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan., Ito H; Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan., Wang L; Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan; Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan., Oda Y; Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan., Orba Y; Division of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan., Sasaki M; Division of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; International Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Nagata K; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto, Japan., Yoshimatsu K; Institute for Genetic Medicine, Hokkaido University, Sapporo, Japan., Asakura H; Tokyo Metropolitan Institute of Public Health, Tokyo, Japan., Nagashima M; Tokyo Metropolitan Institute of Public Health, Tokyo, Japan., Sadamasu K; Tokyo Metropolitan Institute of Public Health, Tokyo, Japan., Yoshimura K; Tokyo Metropolitan Institute of Public Health, Tokyo, Japan., Kuramochi J; Interpark Kuramochi Clinic, Utsunomiya, Japan., Seki M; Department of Molecular Oncology, Graduate School of Medicine, Chiba University, Chiba, Japan., Fujiki R; Department of Molecular Oncology, Graduate School of Medicine, Chiba University, Chiba, Japan., Kaneda A; Department of Molecular Oncology, Graduate School of Medicine, Chiba University, Chiba, Japan., Shimada T; Department of Emergency and Critical Care Medicine, Graduate School of Medicine, Chiba University, Chiba, Japan., Nakada TA; Department of Emergency and Critical Care Medicine, Graduate School of Medicine, Chiba University, Chiba, Japan., Sakao S; Department of Respirology, Graduate School of Medicine, Chiba University, Chiba, Japan., Suzuki T; Department of Respirology, Graduate School of Medicine, Chiba University, Chiba, Japan., Ueno T; Division of Infection and immunity, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan., Takaori-Kondo A; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto, Japan., Ishii KJ; Division of Vaccine Science, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan., Schreiber G; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel., Sawa H; Division of International Research Promotion, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; One Health Research Center, Hokkaido University, Sapporo, Japan; Division of Molecular Pathobiology, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; International Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan., Saito A; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki, Japan; Center for Animal Disease Control, University of Miyazaki, Chiba, Japan; Graduate School of Medicine and Veterinary Medicine, University of Miyazaki, Miyazaki, Japan. Electronic address: sakatsuki@cc.miyazaki-u.ac.jp., Irie T; Institute of Biomedical and Health Sciences, Hiroshima University, Hiroshima, Japan. Electronic address: tirie@hiroshima-u.ac.jp., Tanaka S; Department of Cancer Pathology, Faculty of Medicine, Hokkaido University, Sapporo, Japan; Institute for Chemical Reaction Design and Discovery (WPI-ICReDD), Hokkaido University, Sapporo, Japan. Electronic address: tanaka@med.hokudai.ac.jp., Matsuno K; One Health Research Center, Hokkaido University, Sapporo, Japan; International Collaboration Unit, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan; Division of Risk Analysis and Management, International Institute for Zoonosis Control, Hokkaido University, Sapporo, Japan. Electronic address: matsuk@czc.hokudai.ac.jp., Fukuhara T; Department of Microbiology and Immunology, Graduate School of Medicine, Hokkaido University, Sapporo, Japan. Electronic address: fukut@pop.med.hokudai.ac.jp., Ikeda T; Division of Molecular Virology and Genetics, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto, Japan. Electronic address: ikedat@kumamoto-u.ac.jp., Sato K; Division of Systems Virology, Department of Microbiology and Immunology, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; Graduate School of Medicine, The University of Tokyo, Tokyo, Japan; International Vaccine Design Center, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo, Japan; CREST, Japan Science and Technology Agency, Kawaguchi, Japan. Electronic address: keisato@g.ecc.u-tokyo.ac.jp.

Publikováno v: Cell [Cell] 2022 Jun 09; Vol. 185 (12), pp. 2103-2115.e19. Date of Electronic Publication: 2022 May 02.

The SARS-CoV-2 Lambda variant exhibits enhanced infectivity and immune resistance.

Autor: Kimura I; Division of Systems Virology, Department of Infectious Disease Control, International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 1088639, Japan., Kosugi Y; Division of Systems Virology, Department of Infectious Disease Control, International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 1088639, Japan; Laboratory of Systems Virology, Institute for Frontier Life and Medical Sciences, Kyoto University, Kyoto 6068507, Japan; Graduate School of Pharmaceutical Sciences, Kyoto University, Kyoto 6068501, Japan., Wu J; Department of Molecular Life Science, Tokai University School of Medicine, Isehara, Kanagawa 2591193, Japan; CREST, Japan Science and Technology Agency, Saitama 3220012, Japan., Zahradnik J; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel., Yamasoba D; Division of Systems Virology, Department of Infectious Disease Control, International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 1088639, Japan; Faculty of Medicine, Kobe University, Hyogo 6500017, Japan., Butlertanaka EP; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan., Tanaka YL; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan., Uriu K; Division of Systems Virology, Department of Infectious Disease Control, International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 1088639, Japan; Graduate School of Medicine, The University of Tokyo, 1130033 Tokyo, Japan., Liu Y; Department of Immunochemistry, Research Institute for Microbial Diseases, Osaka University, Osaka 5650871, Japan; Laboratory of Immunochemistry, World Premier International Immunology Frontier Research Centre, Osaka University, Osaka 5650871, Japan., Morizako N; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan., Shirakawa K; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Kazuma Y; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Nomura R; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Horisawa Y; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Tokunaga K; Department of Pathology, National Institute of Infectious Diseases, Tokyo 1628640, Japan., Ueno T; Division of Infection and immunity, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto 8600811, Japan., Takaori-Kondo A; Department of Hematology and Oncology, Graduate School of Medicine, Kyoto University, Kyoto 6068507, Japan., Schreiber G; Department of Biomolecular Sciences, Weizmann Institute of Science, Rehovot 76100, Israel., Arase H; Graduate School of Medicine, The University of Tokyo, 1130033 Tokyo, Japan; Department of Immunochemistry, Research Institute for Microbial Diseases, Osaka University, Osaka 5650871, Japan; Center for Infectious Disease Education and Research, Osaka University, Osaka 5650871, Japan., Motozono C; Division of Infection and immunity, Joint Research Center for Human Retrovirus infection, Kumamoto University, Kumamoto 8600811, Japan., Saito A; Department of Veterinary Science, Faculty of Agriculture, University of Miyazaki, Miyazaki 8892192, Japan; Center for Animal Disease Control, University of Miyazaki, Miyazaki 8892192, Japan; Graduate School of Medicine and Veterinary Medicine, University of Miyazaki, Miyazaki 8892192, Japan., Nakagawa S; Department of Molecular Life Science, Tokai University School of Medicine, Isehara, Kanagawa 2591193, Japan; CREST, Japan Science and Technology Agency, Saitama 3220012, Japan; Bioinformation and DDBJ Center, National Institute of Genetics, Mishima, Shizuoka 4118540, Japan. Electronic address: so@tokai.ac.jp., Sato K; Division of Systems Virology, Department of Infectious Disease Control, International Research Center for Infectious Diseases, The Institute of Medical Science, The University of Tokyo, Tokyo 1088639, Japan; CREST, Japan Science and Technology Agency, Saitama 3220012, Japan; Graduate School of Medicine, The University of Tokyo, 1130033 Tokyo, Japan. Electronic address: KeiSato@g.ecc.u-tokyo.ac.jp.

Publikováno v: Cell reports [Cell Rep] 2022 Jan 11; Vol. 38 (2), pp. 110218. Date of Electronic Publication: 2021 Dec 18.