Zobrazeno 1 - 10
of 314
pro vyhledávání: '"Burke, Martin D."'
Autor:
Ghaffari, Saba, Saleh, Ehsan, Schwing, Alexander G., Wang, Yu-Xiong, Burke, Martin D., Sinha, Saurabh
Protein design, a grand challenge of the day, involves optimization on a fitness landscape, and leading methods adopt a model-based approach where a model is trained on a training set (protein sequences and fitness) and proposes candidates to explore
Externí odkaz:
http://arxiv.org/abs/2305.13650
Autor:
Wang, Hongwei, Li, Weijiang, Jin, Xiaomeng, Cho, Kyunghyun, Ji, Heng, Han, Jiawei, Burke, Martin D.
Molecule representation learning (MRL) methods aim to embed molecules into a real vector space. However, existing SMILES-based (Simplified Molecular-Input Line-Entry System) or GNN-based (Graph Neural Networks) MRL methods either take SMILES strings
Externí odkaz:
http://arxiv.org/abs/2109.09888
Autor:
Chorghade, Rajeev S., Kim, Bo Ram, Launspach, Janice L., Karp, Philip H., Welsh, Michael J., Burke, Martin D.
Publikováno v:
In Journal of Cystic Fibrosis May 2021 20(3):540-550
Autor:
Burke, Martin D.1, Denmark, Scott E.1, Diao, Ying1, Han, Jiawei1, Switzky, Rachel1, Zhao, Huimin1 zhao5@illinois.edu
Publikováno v:
AI Magazine. Mar2024, Vol. 45 Issue 1, p117-123. 7p.
Autor:
Klucznik, Tomasz, Syntrivanis, Leonidas-Dimitrios, Baś, Sebastian, Mikulak-Klucznik, Barbara, Moskal, Martyna, Szymkuć, Sara, Mlynarski, Jacek, Gadina, Louis, Beker, Wiktor, Burke, Martin D., Tiefenbacher, Konrad, Grzybowski, Bartosz A.
Publikováno v:
Nature; Jan2024, Vol. 625 Issue 7995, p508-515, 8p
Autor:
Ghaffari, Saba, Saleh, Ehsan, Schwing, Alexander G., Wang, Yu-Xiong, Burke, Martin D., Sinha, Saurabh
The problem of designing protein sequences with desired properties is challenging, as it requires to explore a high-dimensional protein sequence space with extremely sparse meaningful regions. This has led to the development of model-based optimizati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8fc900b69a6b69e2b72f90c27986019d
http://arxiv.org/abs/2305.13650
http://arxiv.org/abs/2305.13650
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, 2017 May . 114(22), 5564-5566.
Externí odkaz:
https://www.jstor.org/stable/26483351
Autor:
Grillo, Anthony S., SantaMaria, Anna M., Kafina, Martin D., Cioffi, Alexander G., Huston, Nicholas C., Han, Murui, Seo, Young Ah, Yien, Yvette Y., Nardone, Christopher, Menon, Archita V., Fan, James, Svoboda, Dillon C., Anderson, Jacob B., Hong, John D., Nicolau, Bruno G., Subedi, Kiran, Gewirth, Andrew A., Wessling-Resnick, Marianne, Kim, Jonghan, Paw, Barry H., Burke, Martin D.
Publikováno v:
Science, 2017 May 01. 356(6338), 608-616.
Externí odkaz:
https://www.jstor.org/stable/26398999
Publikováno v:
Science, 2003 Oct . 302(5645), 613-618.
Externí odkaz:
http://dx.doi.org/10.1126/science.1089946
Autor:
Blake, Andrew D., Chao, Jianhua, SantaMaria, Anna M., Ekaputri, Stella, Green, Kelsie J., Brown, Samantha T., Rakowski, Christopher K., Choi, Eun-Kyung, Aring, Luisa, Chen, Peng-Jui, Snead, Nicholas M., Matje, Douglas M., Geng, Tao, Octaviani, Angela, Bailey, Keith, Hollenbach, Stanley J., Fan, Timothy M., Seo, Young-Ah, Burke, Martin D.
Publikováno v:
Nature Chemical Biology; 20240101, Issue: Preprints p1-12, 12p