Zobrazeno 1 - 10
of 342
pro vyhledávání: '"Bundschuh, Ralf A."'
Manipulation of temperature can be used to actuate DNA origami nano-hinges containing gold nanoparticles. We develop a physical model of this system that uses partition function analysis of the interaction between the nano-hinge and nanoparticle to p
Externí odkaz:
http://arxiv.org/abs/2101.07935
Publikováno v:
Phys. Rev. E 103, 052404 (2021)
Protein complexes involved in DNA mismatch repair appear to diffuse along dsDNA in order to locate a hemimethylated incision site via a dissociative mechanism. Here, we study the probability that these complexes locate a given target site via a semi-
Externí odkaz:
http://arxiv.org/abs/2012.09844
Akademický článek
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Akademický článek
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Publikováno v:
Phys. Rev. E 99, 022415 (2019)
RNA forms elaborate secondary structures through intramolecular base pairing. These structures perform critical biological functions within each cell. Due to the availability of a polynomial algorithm to calculate the partition function over these st
Externí odkaz:
http://arxiv.org/abs/1808.02351
Autor:
Mabin, Justin W., Woodward, Lauren A., Patton, Robert, Yi, Zhongxia, Jia, Mengxuan, Wysocki, Vicki, Bundschuh, Ralf, Singh, Guramrit
The exon junction complex (EJC) deposited upstream of mRNA exon junctions shapes structure, composition and fate of spliced mRNA ribonucleoprotein particles (mRNPs). To achieve this, the EJC core nucleates assembly of a dynamic shell of peripheral pr
Externí odkaz:
http://arxiv.org/abs/1807.00789
Autor:
Walker, Logan A, Sovic, Michael G, Chiang, Chi-Ling, Hu, Eileen, Denninger, Jiyeon K, Chen, Xi, Kirby, Elizabeth D, Byrd, John C, Muthusamy, Natarajan, Bundschuh, Ralf, Yan, Pearlly
Direct cDNA preamplification protocols developed for single-cell RNA-seq have enabled transcriptome profiling of precious clinical samples and rare cells without sample pooling or RNA extraction. Currently, there is no algorithm optimized to reveal a
Externí odkaz:
http://arxiv.org/abs/1806.03142
Autor:
Chiang, Chi-Ling, Hu, Eileen Y., Chang, Lingqian, Labanowska, Jadwiga, Zapolnik, Kevan, Mo, Xiaokui, Shi, Junfeng, Doong, Tzyy-Jye, Lozanski, Arletta, Yan, Pearlly S., Bundschuh, Ralf, Walker, Logan A., Gallego-Perez, Daniel, Lu, Wu, Long, Meixiao, Kim, Sanggu, Heerema, Nyla A., Lozanski, Gerard, Woyach, Jennifer A., Byrd, John C., Lee, Ly James, Muthusamy, Natarajan
Publikováno v:
In Cell Reports 19 July 2022 40(3)
Autor:
Goswami, Swagata, Mani, Rajeswaran, Nunes, Jessica, Chiang, Chi-Ling, Zapolnik, Kevan, Hu, Eileen, Frissora, Frank, Mo, Xiaokui, Walker, Logan A., Yan, Pearlly, Bundschuh, Ralf, Beaver, Larry, Devine, Raymond, Tsai, Yo-Ting, Ventura, Ann, Xie, Zhiliang, Chen, Min, Lapalombella, Rosa, Walker, Alison, Mims, Alice, Larkin, Karilyn, Grieselhuber, Nicole, Bennett, Chad, Phelps, Mitch, Hertlein, Erin, Behbehani, Gregory, Vasu, Sumithira, Byrd, John C., Muthusamy, Natarajan *
Publikováno v:
In Blood 3 March 2022 139(9):1340-1358
Autor:
Frankhouser, David E, Steck, Sarah, Sovic, Michael G, Belury, Martha A, Wang, Qianben, Clinton, Steven K, Bundschuh, Ralf, Yan, Pearlly S, Yee, Lisa D
Publikováno v:
In The Journal of Nutritional Biochemistry January 2022 99