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Akademický článek
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Autor:
De Jong Walter S, Van Deynze Allen, Massa Alicia N, Stoffel Kevin, Whitty Brett R, Hansey Candice N, Hamilton John P, Douches David S, Buell C Robin
Publikováno v:
BMC Genomics, Vol 12, Iss 1, p 302 (2011)
Abstract Background Current breeding approaches in potato rely almost entirely on phenotypic evaluations; molecular markers, with the exception of a few linked to disease resistance traits, are not widely used. Large-scale sequence datasets generated
Externí odkaz:
https://doaj.org/article/adb00d07aee745ba84a8a03adc1c40ad
Publikováno v:
BMC Evolutionary Biology, Vol 10, Iss 1, p 41 (2010)
Abstract Background The availability of genome and transcriptome sequences for a number of species permits the identification and characterization of conserved as well as divergent genes such as lineage-specific genes which have no detectable sequenc
Externí odkaz:
https://doaj.org/article/4403f71494ac4785ade117290c7e6954
Publikováno v:
BMC Genomics, Vol 10, Iss 1, p 317 (2009)
Abstract Background The Osa1 Genome Annotation of rice (Oryza sativa L. ssp. japonica cv. Nipponbare) is the product of a semi-automated pipeline that does not explicitly predict pseudogenes. As such, it is likely to mis-annotate pseudogenes as funct
Externí odkaz:
https://doaj.org/article/cadd6b4a793b4a1cbe0374f0db54b3dc
Autor:
André Lévesque C, Kamoun Sophien, Leach Jan E, Vuong Hue, Hamilton John, Lang Jillian M, Win Joe, Cheung Foo, Tisserat Ned, Buell C Robin
Publikováno v:
BMC Genomics, Vol 9, Iss 1, p 542 (2008)
Abstract Background Pythium species are an agriculturally important genus of plant pathogens, yet are not understood well at the molecular, genetic, or genomic level. They are closely related to other oomycete plant pathogens such as Phytophthora spe
Externí odkaz:
https://doaj.org/article/7d15aff9126843268d7aac864f36a137
Publikováno v:
BMC Genomics, Vol 9, Iss 1, p 286 (2008)
Abstract Background The Solanaceae family contains a number of important crop species including potato (Solanum tuberosum) which is grown for its underground storage organ known as a tuber. Albeit the 4th most important food crop in the world, other
Externí odkaz:
https://doaj.org/article/565ded1660644302be727569ebb895c5
Autor:
Zhu Wei, Haas Brian J, Nobuta Kan, Egan Amy, Ouyang Shu, Lin Haining, Gu Xun, Silva Joana C, Meyers Blake C, Buell C Robin
Publikováno v:
BMC Plant Biology, Vol 8, Iss 1, p 18 (2008)
Abstract Background High gene numbers in plant genomes reflect polyploidy and major gene duplication events. Oryza sativa, cultivated rice, is a diploid monocotyledonous species with a ~390 Mb genome that has undergone segmental duplication of a subs
Externí odkaz:
https://doaj.org/article/12f0c3d8eafa442593e127ee4e92a7f0
Autor:
Liu Jia, Kozik Alexander, Buell C Robin, Stoffel Kevin, Van Deynze Allen, van der Knaap Esther, Francis David
Publikováno v:
BMC Genomics, Vol 8, Iss 1, p 465 (2007)
Abstract Background Tomato has excellent genetic and genomic resources including a broad set of Expressed Sequence Tag (EST) data and high-density genetic maps. In addition, emerging physical maps and bacterial artificial clone sequence data serve as
Externí odkaz:
https://doaj.org/article/f067184e46f24aaf897583cefa1d3c18
Publikováno v:
BMC Genomics, Vol 7, Iss 1, p 327 (2006)
Abstract Background Recently, genomic sequencing efforts were finished for Oryza sativa (cultivated rice) and Arabidopsis thaliana (Arabidopsis). Additionally, these two plant species have extensive cDNA and expressed sequence tag (EST) libraries. We
Externí odkaz:
https://doaj.org/article/2132e56de6224e62ae05a0bc4038e83f