Zobrazeno 1 - 10
of 37
pro vyhledávání: '"Brunette, TJ"'
Autor:
Armer, Chase, Kane, Hassan, Cortade, Dana, Estell, Dave, Yusuf, Adil, Sanka, Radhakrishna, Redestig, Henning, Brunette, TJ, Kelly, Pete, DeBenedictis, Erika
The grand challenge of protein engineering is the development of computational models that can characterize and generate protein sequences for any arbitrary function. However, progress today is limited by lack of 1) benchmarks with which to compare c
Externí odkaz:
http://arxiv.org/abs/2309.09955
Autor:
Brunette, TJ, Bick, Matthew J., Hansen, Jesse M., Chow, Cameron M., Kollman, Justin M., Baker, David
Publikováno v:
Proceedings of the National Academy of Sciences of the United States of America, 2020 Apr . 117(16), 8870-8875.
Externí odkaz:
https://www.jstor.org/stable/26929655
Akademický článek
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Autor:
Huddy, Timothy F., Hsia, Yang, Kibler, Ryan D., Xu, Jinwei, Bethel, Neville, Nagarajan, Deepesh, Redler, Rachel, Leung, Philip J. Y., Courbet, Alexis, Yang, Erin C., Bera, Asim K., Coudray, Nicolas, Calise, S. John, Davila-Hernandez, Fatima A., Weidle, Connor, Han, Hannah L., Li, Zhe, McHugh, Ryan, Reggiano, Gabriella, Kang, Alex, Sankaran, Banumathi, Dickinson, Miles S., Coventry, Brian, Brunette, TJ, Liu, Yulai, Dauparas, Justas, Borst, Andrew J., Ekiert, Damian, Kollman, Justin M., Bhabha, Gira, Baker, David
Publikováno v:
bioRxiv
A wooden house frame consists of many different lumber pieces, but because of the regularity of these building blocks, the structure can be designed using straightforward geometrical principles. The design of multicomponent protein assemblies in comp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::cfb91dfa4c6cc91a458d3960dea5d114
https://europepmc.org/articles/PMC10274926/
https://europepmc.org/articles/PMC10274926/
Autor:
Brunette, TJ
Publikováno v:
Open Access Dissertations.
The most significant impediment for protein structure prediction is the inadequacy of conformation space search. Conformation space is too large and the energy landscape too rugged for existing search methods to consistently find near-optimal minima.
Autor:
Brunette, TJ
Publikováno v:
Doctoral Dissertations Available from Proquest.
The most significant impediment for protein structure prediction is the inadequacy of conformation space search. Conformation space is too large and the energy landscape too rugged for existing search methods to consistently find near-optimal minima.
Externí odkaz:
https://scholarworks.umass.edu/dissertations/AAI3461991
Autor:
Brunette, TJ, Parmeggiani, F, Huang, PS, Bhabha, G, Ekiert, DC, Tsutakawa, SE, Hura, GL, Tainer, JA, Baker, D
Publikováno v:
Nature, vol 528, iss 7583
Brunette, TJ; Parmeggiani, F; Huang, PS; Bhabha, G; Ekiert, DC; Tsutakawa, SE; et al.(2015). Exploring the repeat protein universe through computational protein design. Nature, 528(7583), 580-584. doi: 10.1038/nature16162. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/1pb2b52f
Brunette, TJ; Parmeggiani, F; Huang, PS; Bhabha, G; Ekiert, DC; Tsutakawa, SE; et al.(2015). Exploring the repeat protein universe through computational protein design. Nature, 528(7583), 580-584. doi: 10.1038/nature16162. Lawrence Berkeley National Laboratory: Lawrence Berkeley National Laboratory. Retrieved from: http://www.escholarship.org/uc/item/1pb2b52f
© 2015 Macmillan Publishers Limited. All rights reserved. A central question in protein evolution is the extent to which naturally occurring proteins sample the space of folded structures accessible to the polypeptide chain. Repeat proteins composed
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::bae418dc5b9ea176a6fbfc91abe3347f
https://escholarship.org/uc/item/1pb2b52f
https://escholarship.org/uc/item/1pb2b52f
Autor:
Yeh, Chun-Ting1, Brunette, TJ2, Baker, David2, McIntosh-Smith, Simon1, Parmeggiani, Fabio3,4 fabio.parmeggiani@bristol.ac.uk
Publikováno v:
Journal of Structural Biology. Feb2018, Vol. 201 Issue 2, p100-107. 8p.
Autor:
Brunette, TJ
The most significant impediment for protein structure prediction is the inadequacy of conformation space search. Conformation space is too large and the energy landscape too rugged for existing search methods to consistently find near-optimal minima.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::522b8716f3da5b6a3c9e7706f1f62127
Akademický článek
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