Community-developed checklists for publishing images and image analyses.

Autor: Schmied C; Fondazione Human Technopole, Milano, Italy. schmied@fmp-berlin.de.; Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Berlin, Germany. schmied@fmp-berlin.de., Nelson MS; Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA., Avilov S; Max Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany., Bakker GJ; Medical BioSciences Department, Radboud University Medical Centre, Nijmegen, the Netherlands., Bertocchi C; Laboratory for Molecular Mechanics of Cell Adhesions, Pontificia Universidad Católica de Chile Santiago, Santiago de Chile, Chile.; Graduate School of Engineering Science, Osaka University, Osaka, Japan., Bischof J; Euro-BioImaging ERIC, Bio-Hub, Heidelberg, Germany., Boehm U; Carl Zeiss AG, Oberkochen, Germany., Brocher J; Scientific Image Processing and Analysis, BioVoxxel, Ludwigshafen, Germany., Carvalho MT; Nanophotonics and BioImaging Facility at INL, International Iberian Nanotechnology Laboratory, Braga, Portugal., Chiritescu C; Phi Optics, Inc., Champaign, IL, USA., Christopher J; Biochemistry Center Heidelberg, Heidelberg University, Heidelberg, Germany., Cimini BA; Imaging Platform, Broad Institute, Cambridge, MA, USA., Conde-Sousa E; i3S, Instituto de Investigação e Inovação Em Saúde and INEB, Instituto de Engenharia Biomédica, Universidade do Porto, Porto, Portugal., Ebner M; Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Berlin, Germany., Ecker R; Translational Research Institute, Queensland University of Technology, Woolloongabba, Queensland, Australia.; School of Biomedical Sciences, Faculty of Health, Queensland University of Technology, Brisbane, Queensland, Australia.; TissueGnostics GmbH, Vienna, Austria., Eliceiri K; Department of Medical Physics and Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, USA., Fernandez-Rodriguez J; Centre for Cellular Imaging Core Facility, Sahlgrenska Academy, University of Gothenburg, Gothenburg, Sweden., Gaudreault N; Allen Institute for Cell Science, Seattle, WA, USA., Gelman L; Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland., Grunwald D; RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA, USA., Gu T; University of Oklahoma, Norman, OK, USA., Halidi N; Advanced Light Microscopy Unit, Centre for Genomic Regulation, Barcelona, Spain., Hammer M; RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA, USA., Hartley M; European Molecular Biology Laboratory (EMBL), European Bioinformatics Institute, Hinxton, UK., Held M; Centre for Cell Imaging, the University of Liverpool, Liverpool, UK., Jug F; Fondazione Human Technopole, Milano, Italy., Kapoor V; Department of AI Research, Kapoor Labs, Paris, France., Koksoy AA; MD Anderson Cancer Center, Houston, TX, USA., Lacoste J; MIA Cellavie Inc., Montreal, Quebec, Canada., Le Dévédec S; Division of Drug Discovery and Safety, Cell Observatory, Leiden Academic Centre for Drug Research, Leiden University, Leiden, the Netherlands., Le Guyader S; Karolinska Institutet, Huddinge, Sweden., Liu P; Key Laboratory for Modern Measurement Technology and Instruments of Zhejiang Province, College of Optical and Electronic Technology, China Jiliang University, Hangzhou, China., Martins GG; Advanced Imaging Facility, Instituto Gulbenkian de Ciência, Oeiras, Portugal., Mathur A; Euro-BioImaging ERIC, Bio-Hub, Heidelberg, Germany., Miura K; Bioimage Analysis and Research, Heidelberg, Germany., Montero Llopis P; MicRoN Core, Harvard Medical School, Boston, MA, USA., Nitschke R; Life Imaging Center, Signalling Research Centres CIBSS and BIOSS, University of Freiburg, Freiburg, Germany., North A; Bio-Imaging Resource Center, the Rockefeller University, New York, NY, USA., Parslow AC; Baker Institute Microscopy Platform, Baker Heart and Diabetes Institute, Melbourne, Victoria, Australia., Payne-Dwyer A; School of Physics, Engineering and Technology, University of York, Heslington, UK., Plantard L; Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland., Ali R; King Abdullah International Medical Research Center (KAIMRC), Medical Research Core Facility and Platforms (MRCFP), King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), Ministry of National Guard Health Affairs, Riyadh, Saudi Arabia., Schroth-Diez B; Light Microscopy Facility, Max Planck Institute of Molecular Cell Biology and Genetics Dresden, Dresden, Germany., Schütz L; ariadne.ai (Germany) GmbH, Heidelberg, Germany., Scott RT; Space Biosciences Division, NASA Ames Research Center, Moffett Field, CA, USA., Seitz A; BioImaging and Optics Platform, Faculty of Life Sciences (SV), École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland., Selchow O; Microscopy and BioImaging Consulting, Image Processing and Large Data Handling, Gera, Germany., Sharma VP; Bio-Imaging Resource Center, the Rockefeller University, New York, NY, USA., Spitaler M; Max Planck Institute of Biochemistry, Martinsried, Germany., Srinivasan S; Imaging and Morphology Support Core, Oregon National Primate Research Center, OHSU West Campus, Beaverton, OR, USA., Strambio-De-Castillia C; Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA, USA., Taatjes D; Department of Pathology and Laboratory Medicine, Microscopy Imaging Center, Center for Biomedical Shared Resources, University of Vermont, Burlington, VT, USA., Tischer C; Centre for Bioimage Analysis, EMBL Heidelberg, Heidelberg, Germany. christian.tischer@embl.de., Jambor HK; NCT-UCC, Medizinische Fakultät TU Dresden, Dresden, Germany. helena.jambor@tu-dresden.de.

Publikováno v: Nature methods [Nat Methods] 2024 Feb; Vol. 21 (2), pp. 170-181. Date of Electronic Publication: 2023 Sep 14.

Community-developed checklists for publishing images and image analyses.

Autor: Schmied C; Fondazione Human Technopole, Viale Rita Levi-Montalcini 1, 20157 Milano, Italy.; Present address: Leibniz-Forschungsinstitut für Molekulare Pharmakologie (FMP), Robert-Rössle-Str. 10, 13125 Berlin, Germany., Nelson MS; Department of Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA., Avilov S; Max Planck Institute of Immunobiology and Epigenetics, 79108 Freiburg, Germany., Bakker GJ; Medical BioSciences department, Radboud University Medical Centre, Nijmegen, Netherlands., Bertocchi C; Laboratory for Molecular mechanics of cell adhesions, Pontificia Universidad Católica de Chile Santiago.; Osaka University, Graduate School of Engineering Science, Japan., Bischof J; Euro-BioImaging ERIC, Bio-Hub, Meyerhofstr. 1, 69117 Heidelberg, Germany., Boehm U; Carl Zeiss AG, Carl-Zeiss-Straße 22, 73447 Oberkochen, Germany., Brocher J; BioVoxxel, Scientific Image Processing and Analysis, Eugen-Roth-Strasse 8, 67071 Ludwigshafen, Germany., Carvalho M; Nanophotonics and BioImaging Facility at INL, International Iberian Nanotechnology Laboratory, 4715-330, Portugal., Chiritescu C; Phi Optics, Inc., 1800 S. Oak St, Ste 106, Champaign, IL 61820, USA., Christopher J; Biochemistry Center Heidelberg, Heidelberg University, Germany., Cimini BA; Imaging Platform, Broad Institute, Cambridge, MA 02142., Conde-Sousa E; i3S, Instituto de Investigação e Inovação Em Saúde and INEB, Instituto de Engenharia Biomédica, Universidade do Porto, Porto, Portugal., Ebner M; Fondazione Human Technopole, Viale Rita Levi-Montalcini 1, 20157 Milano, Italy., Ecker R; Translational Research Institute, Queensland University of Technology, 37 Kent Street, Woolloongabba, QLD 4102, Australia.; School of Biomedical Sciences, Faculty of Health, Queensland University of Technology, Brisbane, QLD 4059, Australia.; TissueGnostics GmbH, 1020 Vienna, Austria., Eliceiri K; Department of Medical Physics and Biomedical Engineering, University of Wisconsin-Madison, Madison, WI, 53706, USA., Fernandez-Rodriguez J; Centre for Cellular Imaging Core Facility, Sahlgrenska Academy, University of Gothenburg, Sweden., Gaudreault N; Allen Institute for Cell Science, Seattle, WA, USA., Gelman L; Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland., Grunwald D; RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA., Gu T; University of Oklahoma, Norman, OK, USA., Halidi N; Advanced Light Microscopy Unit, Centre for Genomic Regulation, Barcelona, Spain., Hammer M; RNA Therapeutics Institute, University of Massachusetts Chan Medical School, Worcester, MA 01605, USA., Hartley M; European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Hinxton, UK., Held M; Centre for Cell Imaging, The University of Liverpool, UK., Jug F; Fondazione Human Technopole, Viale Rita Levi-Montalcini 1, 20157 Milano, Italy., Kapoor V; Department of AI research, Kapoor Labs, Paris, 75005, France., Koksoy AA; MD Anderson Cancer Center, Houston, TX, USA., Lacoste J; MIA Cellavie Inc., Montreal, QC Canada., Dévédec SL; Division of Drug Discovery and Safety, Cell Observatory, Leiden Academic Centre for Drug Research, Leiden University, 2333 CC Leiden, The Netherlands., Guyader SL; Karolinska Institutet, Hälsovägen 7C, 14157, Huddinge, Sweden., Liu P; Key Laboratory for Modern Measurement Technology and Instruments of Zhejiang Province, College of Optical and Electronic Technology, China Jiliang University, Hangzhou, China., Martins GG; Advanced Imaging Facility, Instituto Gulbenkian de Ciência, Oeiras 2780-156 - Portugal., Mathur A; Euro-BioImaging ERIC, Bio-Hub, Meyerhofstr. 1, 69117 Heidelberg, Germany., Miura K; Bioimage Analysis & Research, 69127 Heidelberg/Germany., Montero Llopis P; MicRoN Core, Harvard Medical School, Boston, MA, USA., Nitschke R; Life Imaging Center, Signalling Research Centres CIBSS and BIOSS, University of Freiburg, Germany., North A; Bio-Imaging Resource Center, The Rockefeller University, New York, NY USA., Parslow AC; Baker Institute Microscopy Platform, Baker Heart and Diabetes Institute, Melbourne, VIC, 3004, Australia., Payne-Dwyer A; School of Physics, Engineering and Technology, University of York, Heslington, YO10 5DD, UK., Plantard L; Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland., Ali R; King Abdullah International Medical Research Center (KAIMRC), Medical Research Core Facility and Platforms (MRCFP), King Saud bin Abdulaziz University for Health Sciences (KSAU-HS), Ministry of National Guard Health Affairs (MNGHA), Riyadh 11481, Saudi Arabia., Schroth-Diez B; Light Microscopy Facility, Max Planck Institute of Molecular Cell Biology and Genetics Dresden, Pfotenhauerstrasse 108, 01307 Dresden, Germany., Schütz L; ariadne.ai (Germany) GmbH, 69115 Heidelberg, Germany., Scott RT; Space Biosciences Division, NASA Ames Research Center, Moffett Field, CA, 94035, USA., Seitz A; BioImaging & Optics Platform (BIOP), Ecole Polytechnique Fédérale de Lausanne (EPFL), Faculty of Life sciences (SV), CH-1015 Lausanne., Selchow O; Microscopy & BioImaging Consulting, Image Processing & Large Data Handling, Tobias-Hoppe-Strassse 3, 07548 Gera, Germany., Sharma VP; Bio-Imaging Resource Center, The Rockefeller University, New York, NY USA., Spitaler M; Max Planck Institute of Biochemistry, Am Klopferspitz 18, 82152 Martinsried, Germany., Srinivasan S; Imaging and Morphology Support Core, Oregon National Primate Research Center - (ONPRC - OHSU West Campus), Beaverton, Oregon 97006, USA., Strambio-De-Castillia C; Program in Molecular Medicine, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA., Taatjes D; Department of Pathology and Laboratory Medicine, Microscopy Imaging Center (RRID# SCR_018821), Center for Biomedical Shared Resources, University of Vermont, Burlington, VT 05405 USA., Tischer C; Centre for Bioimage Analysis, EMBL Heidelberg, Meyerhofstr. 1, 69117 Heidelberg, Germany., Jambor HK; NCT-UCC, Medizinische Fakultät TU Dresden, Fetscherstrasse 105, 01307 Dresden/Germany.

Publikováno v: ArXiv [ArXiv] 2023 Sep 14. Date of Electronic Publication: 2023 Sep 14.

Binding to the Other Side: The AT-Hook DNA-Binding Domain Allows Nuclear Factors to Exploit the DNA Minor Groove.

Autor: Battista, Sabrina¹ (AUTHOR) sabrina.battista@cnr.it, Fedele, Monica¹ (AUTHOR) monica.fedele@cnr.it, Secco, Luca² (AUTHOR) luca.secco@phd.units.it, Ingo, Alberto Maria Davide² (AUTHOR) albertoingo@gmail.com, Sgarra, Riccardo² (AUTHOR) rsgarra@units.it, Manfioletti, Guidalberto² (AUTHOR) rsgarra@units.it

Publikováno v: International Journal of Molecular Sciences. Aug2024, Vol. 25 Issue 16, p8863. 27p.

What we can learn from deep space communication for reproducible bioimaging and data analysis.

Autor: Woller, Tatiana^1,2, Cawthorne, Christopher J.³, Slootmaekers, Romain Raymond Agnes⁴, Roig, Ingrid Barcena⁵, Botzki, Alexander⁶, Munck, Sebastian^2,7 Sebastian.munck@kuleuven.be

Publikováno v: Molecular Systems Biology. 1/1/2024, Vol. 20 Issue 1, p1-5. 5p.

Efficient Elimination of mtDNA from Mammalian Cells with 2′,3′-Dideoxycytidine.

Autor: Kozhukhar, Natalya, Alexeyev, Mikhail F.

Publikováno v: DNA (2673-8856); Sep2024, Vol. 4 Issue 3, p201-211, 11p