Telescope: an interactive tool for managing large scale analysis from mobile devices

Autor: Brito, Jaqueline J., Mosqueiro, Thiago, Rotman, Jeremy, Xue, Victor, Chapski, Douglas J., De la Hoz, Juan, Matias, Paulo, Martin, Lana, Zelikovsky, Alex, Pellegrinni, Matteo, Mangul, Serghei

In today's world of big data, computational analysis has become a key driver of biomedical research. Recent exponential growth in the volume of available omics data has reshaped the landscape of contemporary biology, creating demand for a continuous

Externí odkaz: http://arxiv.org/abs/1909.12469

Critical Assessment of Metagenome Interpretation: the second round of challenges

Autor: Meyer, Fernando, Fritz, Adrian, Deng, Zhi-Luo, Koslicki, David, Lesker, Till Robin, Gurevich, Alexey, Robertson, Gary, Alser, Mohammed, Antipov, Dmitry, Beghini, Francesco, Bertrand, Denis, Brito, Jaqueline J, Brown, C Titus, Buchmann, Jan, Buluç, Aydin, Chen, Bo, Chikhi, Rayan, Clausen, Philip TLC, Cristian, Alexandru, Dabrowski, Piotr Wojciech, Darling, Aaron E, Egan, Rob, Eskin, Eleazar, Georganas, Evangelos, Goltsman, Eugene, Gray, Melissa A, Hansen, Lars Hestbjerg, Hofmeyr, Steven, Huang, Pingqin, Irber, Luiz, Jia, Huijue, Jørgensen, Tue Sparholt, Kieser, Silas D, Klemetsen, Terje, Kola, Axel, Kolmogorov, Mikhail, Korobeynikov, Anton, Kwan, Jason, LaPierre, Nathan, Lemaitre, Claire, Li, Chenhao, Limasset, Antoine, Malcher-Miranda, Fabio, Mangul, Serghei, Marcelino, Vanessa R, Marchet, Camille, Marijon, Pierre, Meleshko, Dmitry, Mende, Daniel R, Milanese, Alessio, Nagarajan, Niranjan, Nissen, Jakob, Nurk, Sergey, Oliker, Leonid, Paoli, Lucas, Peterlongo, Pierre, Piro, Vitor C, Porter, Jacob S, Rasmussen, Simon, Rees, Evan R, Reinert, Knut, Renard, Bernhard, Robertsen, Espen Mikal, Rosen, Gail L, Ruscheweyh, Hans-Joachim, Sarwal, Varuni, Segata, Nicola, Seiler, Enrico, Shi, Lizhen, Sun, Fengzhu, Sunagawa, Shinichi, Sørensen, Søren Johannes, Thomas, Ashleigh, Tong, Chengxuan, Trajkovski, Mirko, Tremblay, Julien, Uritskiy, Gherman, Vicedomini, Riccardo, Wang, Zhengyang, Wang, Ziye, Wang, Zhong, Warren, Andrew, Willassen, Nils Peder, Yelick, Katherine, You, Ronghui, Zeller, Georg, Zhao, Zhengqiao, Zhu, Shanfeng, Zhu, Jie, Garrido-Oter, Ruben, Gastmeier, Petra, Hacquard, Stephane, Häußler, Susanne, Khaledi, Ariane, Maechler, Friederike, Mesny, Fantin, Radutoiu, Simona, Schulze-Lefert, Paul, Smit, Nathiana, Strowig, Till

Publikováno v: Nature methods, vol 19, iss 4

Evaluating metagenomic software is key for optimizing metagenome interpretation and focus of the Initiative for the Critical Assessment of Metagenome Interpretation (CAMI). The CAMI II challenge engaged the community to assess methods on realistic an

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______325::b13a1bde0c462dcb7d7ce8cf8e2d39b8
https://escholarship.org/uc/item/4wf2589r

Additional file 2 of Benchmarking of computational error-correction methods for next-generation sequencing data

Autor: Mitchell, Keith, Brito, Jaqueline J., Mandric, Igor, Qiaozhen Wu, Knyazev, Sergey, Chang, Sei, Martin, Lana S., Karlsberg, Aaron, Gerasimov, Ekaterina, Littman, Russell, Hill, Brian L., Wu, Nicholas C., Yang, Harry Taegyun, Hsieh, Kevin, Chen, Linus, Littman, Eli, Shabani, Taylor, Enik, German, Yao, Douglas, Sun, Ren, Schroeder, Jan, Eleazar Eskin, Zelikovsky, Alex, Skums, Pavel, Pop, Mihai, Mangul, Serghei

Additional file 2. Review history.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4ab2f8fe7bb04d4f072699bfe54d0b7e

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