Supplementary Figure Legend from Expanding Epigenomics to Archived FFPE Tissues: An Evaluation of DNA Repair Methodologies

Autor: David Shibata, Domenico Coppola, Abidemi O. Ajidahun, Ryan M. Putney, Steven A. Eschrich, Bridget M. Riggs, Anders E. Berglund, Erin M. Siegel

Supplementary Figure Legend from Expanding Epigenomics to Archived FFPE Tissues: An Evaluation of DNA Repair Methodologies

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c178b8f025e30da3b442085f8dc2c848
https://doi.org/10.1158/1055-9965.22438261

Data from Expanding Epigenomics to Archived FFPE Tissues: An Evaluation of DNA Repair Methodologies

Autor: David Shibata, Domenico Coppola, Abidemi O. Ajidahun, Ryan M. Putney, Steven A. Eschrich, Bridget M. Riggs, Anders E. Berglund, Erin M. Siegel

Background: Epigenome-wide association studies are emerging in the field of cancer epidemiology with the rapid development of large-scale methylation array platforms. Until recently, these methods were only valid for DNA from flash frozen (FF) tissue

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::128f788aef94a2e80bf35b2e0e89aeda
https://doi.org/10.1158/1055-9965.c.6516280.v1

Novel Common Genetic Susceptibility Loci for Colorectal Cancer

Autor: Katja Butterbach, Julyann Pérez-Mayoral, Douglas F. Easton, Stefanie Brezina, Ben Zhang, Frank J. Manion, Hansong Wang, Sanford D. Markowitz, Liesel M. FitzGerald, Sun Ha Jee, Michelle Cotterchio, Daniel D. Buchanan, Timothy R. Church, Wolfgang Lieb, Xiao-Ou Shu, John L. Hopper, Stephanie A. Bien, Manuela Gago-Dominguez, Jian Gong, Laurence N. Kolonel, Graham G. Giles, Leon Raskin, Yingchang Lu, Kristen Anton, Charles S. Fuchs, Fränzel J.B. van Duijnhoven, Hermann Brenner, Yi Lin, Clicerio Gonzalez-Villalpando, Yong-Bing Xiang, Aaron K. Aragaki, Daniela Seminara, Stephanie M. Gogarten, Gad Rennert, Jose E. Castelao, Rocky Fischer, Antonio J. Molina, Jarmo Virtamo, Tabitha A. Harrison, Volker Arndt, Lee Soo Chin, Michael Hoffmeister, Mark A. Jenkins, Shu Chen Huang, Chris S. Carlson, Stéphane Bézieau, Rebecca D. Jackson, Bhramar Mukherjee, Darin Taverna, Bridget M. Riggs, Christopher K. Edlund, Christopher A. Haiman, Melissa C. Southey, Anna H. Wu, Marilena Melas, Antonia Trichopoulou, Hedy S. Rennert, Gianluca Severi, Stephen B. Gruber, Noralane M. Lindor, Gerhard A. Coetzee, Richard B. Hayes, Sarah J. Plummer, Keitaro Matsuo, Mathieu Lemire, Philipp Hofer, Neil Murphy, José María Huerta, Paul D.P. Pharoah, Erin M. Siegel, Sébastien Küry, Thomas J. Hudson, Annika Lindblom, Marcia Cruz Correa, Michael O. Woods, Sophia Harlid, Tilman Kuehn, David Shibata, Christopher I. Li, Stephen N. Thibodeau, Stephen J. Chanock, Jochen Hampe, Flavio Lejbkowicz, Jeroen R. Huyghe, Suminori Kono, Jenny Chang-Claude, Aung Ko Win, Brent W. Zanke, Alicja Wolk, David V. Conti, Elena M. Gonzalez-Villalpando, Christopher I. Amos, Shuo Jiao, Domenico Palli, Vicente Martín, Jesus P. Paredes Cotoré, Stephanie J. Weinstein, Andrea Gsur, William M. Grady, Koichi Matsuda, Loic Le Marchand, Hanane Omichessan, Marc J. Gunter, Graham Casey, Li Li, Zsofia K. Stadler, Eric J. Jacobs, Kevin McDonnell, Dallas R. English, Demetrius Albanes, Amit Joshi, Wei Zheng, Mariana C. Stern, Cecelia A. Laurie, Jing Ma, Cornelia M. Ulrich, Stephanie L. Schmit, Victor Moreno, John D. Potter, Chenxu Qu, Bette J. Caan, Heinz-Josef Lenz, M. Henar Alonso, Andrea Z. LaCroix, Christoph Mancao, John F. Harju, Yun Ru Liu, Jane C. Figueiredo, Gregory Idos, Kana Wu, Duncan C. Thomas, Motoki Iwasaki, W. James Gauderman, Thomas A. Sellers, David Van Den Berg, Barbara K. Fortini, David N. Levine, James M. Church, Ya Wen Cheng, Edith J. M. Feskens, Edward Giovannucci, Manish Gala, Polly A. Newcomb, Charles Kooperberg, Iona Cheng, David J. Hunter, Martha L. Slattery, Roger L. Milne, Lars G. Fritsche, Niha Zubair, Steven Gallinger, Yi Xin Zeng, Wei Shi, Andrew T. Chan, Fotios Loupakis, Vittorio Krogh, Clemens Schafmayer, Sun-Seog Kweon, Bethany van Guelpan, Amanda Bloomer, Kenneth Offit, Stephanie Tring, Shoichiro Tsugane, David Duggan, Fredrick R. Schumacher, Joseph Vijai, Weihua Jia, Marie-Christine Boutron-Ruault, Joel K. Greenson, Frank Luh, Ulrike Peters, Keith R. Curtis, Juergen Boehm, Robert E. Schoen, Sonja I. Berndt, Elizabeth L. Barry, Sebastian Stintzing, Li Hsu, Emily White, Conghui Qu, Peter T. Campbell, Caroline McNeil, Yun Yen

Publikováno v: Dipòsit Digital de la UB
Universidad de Barcelona
Journal of the National Cancer Institute 111 (2019) 2
Journal of the National Cancer Institute, 111(2), 146-157
Schmit, Stephanie L; Edlund, Christopher K; Schumacher, Fredrick R; Gong, Jian; Harrison, Tabitha A; Huyghe, Jeroen R; et al.(2018). Novel Common Genetic Susceptibility Loci for Colorectal Cancer.. Journal of the National Cancer Institute. doi: 10.1093/jnci/djy099. UC San Diego: Retrieved from: http://www.escholarship.org/uc/item/3bk0g2vk

Background Previous genome-wide association studies (GWAS) have identified 42 loci (P < 5 × 10−8) associated with risk of colorectal cancer (CRC). Expanded consortium efforts facilitating the discovery of additional susceptibility loci may capture

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::794875559bd152ce5b1831f354674e44
https://doi.org/10.1093/jnci/djy099

Phospholipids of the Differentiating Species of Tetrahymena

Autor: Alexander J. Burdette, James K. Sanstead, Alyssa B. Maki, Phillip E. Ryals, Bridget M. Riggs

Publikováno v: The Journal of Eukaryotic Microbiology. 53:12-15

The whole-cell phospholipid composition of the six known polymorphic species of Tetrahymena has been examined by [(3)H]acetate and [(3)H]myristic acid radiolabeling, and by gas-liquid chromatography of total phospholipid-bound fatty acids. Five of th

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbb566948574595acb5521c29057bbc1
https://doi.org/10.1111/j.1550-7408.2005.00069.x

Phosphatidylinositol Synthase of Tetrahymena: Inositol Isomers as Substrates in Phosphatidylinositol Biosynthesis and Headgroup Exchange Reactions.

Autor: Riggs, Bridget M., Lansley, Tanya A., Ryals, Phillip E.

Publikováno v: Journal of Eukaryotic Microbiology; Mar2007, Vol. 54 Issue 2, p119-124, 6p, 1 Diagram, 3 Charts, 3 Graphs