Zobrazeno 1 - 10
of 36
pro vyhledávání: '"Brian Jiménez"'
Publikováno v:
Frontiers in Molecular Biosciences, Vol 10 (2023)
Externí odkaz:
https://doaj.org/article/c6b1e0a1ec9a424099b712db148f2fe3
Autor:
Luis Angel Rodríguez-Lumbreras, Brian Jiménez-García, Silvia Giménez-Santamarina, Juan Fernández-Recio
Publikováno v:
Frontiers in Molecular Biosciences, Vol 9 (2022)
Proteins and nucleic acids are essential biological macromolecules for cell life. Indeed, interactions between proteins and DNA regulate many biological processes such as protein synthesis, signal transduction, DNA storage, or DNA replication and rep
Externí odkaz:
https://doaj.org/article/16eae038fc514e338ef924ba7bea44f7
Publikováno v:
Frontiers in Molecular Biosciences, Vol 9 (2022)
Externí odkaz:
https://doaj.org/article/59e59842de28456ba517bc0748db7837
Publikováno v:
Nature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
Most approaches for modeling the membrane protein complexes are not capable of incorporating the topological information provided by the membrane. Here authors present an integrative computational protocol for the modeling of membrane-associated prot
Externí odkaz:
https://doaj.org/article/ddecf94631954d58846ce015c43e0b7e
Autor:
Lisbeth R. Kjølbye, Gilberto P. Pereira, Alessio Bartocci, Martina Pannuzzo, Simone Albani, Alessandro Marchetto, Brian Jiménez-García, Juliette Martin, Giulia Rossetti, Marco Cecchini, Sangwook Wu, Luca Monticelli, Paulo C. T. Souza
Publikováno v:
QRB Discovery, Vol 3 (2022)
Coarse-grained (CG) modelling with the Martini force field has come of age. By combining a variety of bead types and sizes with a new mapping approach, the newest version of the model is able to accurately simulate large biomolecular complexes at mil
Externí odkaz:
https://doaj.org/article/7aa32db6405a4bcaa6e367b8f437930f
Autor:
Rodrigo V. Honorato, Panagiotis I. Koukos, Brian Jiménez-García, Andrei Tsaregorodtsev, Marco Verlato, Andrea Giachetti, Antonio Rosato, Alexandre M. J. J. Bonvin
Publikováno v:
Frontiers in Molecular Biosciences, Vol 8 (2021)
Structural biology aims at characterizing the structural and dynamic properties of biological macromolecules at atomic details. Gaining insight into three dimensional structures of biomolecules and their interactions is critical for understanding the
Externí odkaz:
https://doaj.org/article/a833d05f08624cf6b5a79f7b0b606857
Autor:
Miriam García, Gema Manrique, Sarah N. Fernández, Yolanda Puerta, Patricia Paredes, Alba M. Corchado, Ana B. García-Moreno, Brian Jiménez, Santiago Mencía
Publikováno v:
Sleep Medicine: X, Vol 2, Iss , Pp 100020- (2020)
Objective: to analyze the sleep characteristics of the parents of children admitted to a pediatric intensive care unit (PICU), the possible risk factors and impact of sleep quality on their daily life activities. Methods: Parents of children admitted
Externí odkaz:
https://doaj.org/article/6448f40a95dc4aad8046376455a61d05
Publikováno v:
Nucleic Acids Research.
Computational docking is an instrumental method of the structural biology toolbox. Specifically, integrative modeling software, such as LightDock, arise as complementary and synergetic methods to experimental structural biology techniques. Ubiquitous
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::bf34bdc8ecc5f0b27a73040452f6efc0
https://doi.org/10.1093/nar/gkad327
https://doi.org/10.1093/nar/gkad327
Autor:
Gilberto P. Pereira, Brian Jiménez-García, Riccardo Pellarin, Guillaume Launay, Sangwook Wu, Juliette Martin, Paulo C. T. Souza
Proteolysis targeting chimeras (PROTACS) are ligands that can mediate interaction between a protein target and a E3 ligase, forming a ternary complex bound to the ubiquitination machinery, leading to target degradation. This technology has become an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1b1918daddb970ad2e01b89eb3ecc8a0
https://doi.org/10.1101/2023.02.16.528819
https://doi.org/10.1101/2023.02.16.528819
Autor:
Hugo Schweke, Qifang Xu, Gerardo Tauriello, Lorenzo Pantolini, Torsten Schwede, Frédéric Cazals, Alix Lhéritier, Juan Fernandez-Recio, Luis Ángel Rodríguez-Lumbreras, Ora Schueler-Furman, Julia K. Varga, Brian Jiménez-García, Manon F. Réau, Alexandre Bonvin, Castrense Savojardo, Pier-Luigi Martelli, Rita Casadio, Jérôme Tubiana, Haim Wolfson, Romina Oliva, Didier Barradas-Bautista, Tiziana Ricciardelli, Luigi Cavallo, Česlovas Venclovas, Kliment Olechnovič, Raphael Guerois, Jessica Andreani, Juliette Martin, Xiao Wang, Daisuke Kihara, Anthony Marchand, Bruno Correia, Xiaoqin Zou, Sucharita Dey, Roland Dunbrack, Emmanuel Levy, Shoshana Wodak
Reliably scoring and ranking candidate models of protein complexes and assigning their oligomeric state from the structure of the crystal lattice represent outstanding challenges. A community-wide effort was launched to tackle these challenges. The l
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::adaf2d977a6fae24f92d44626aa47f9a
https://doi.org/10.22541/au.167569565.51141128/v1
https://doi.org/10.22541/au.167569565.51141128/v1