Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Brian A. Firek"'
Autor:
Yue Clare Lou, Jordan Hoff, Matthew R. Olm, Jacob West-Roberts, Spencer Diamond, Brian A. Firek, Michael J. Morowitz, Jillian F. Banfield
Publikováno v:
Microbiome, Vol 11, Iss 1, Pp 1-14 (2023)
Abstract Background Metagenomics analyses can be negatively impacted by DNA contamination. While external sources of contamination such as DNA extraction kits have been widely reported and investigated, contamination originating within the study itse
Externí odkaz:
https://doaj.org/article/08a002dbee094fb5b2ab39b7a014e7e3
Autor:
Patrick T. West, Samantha L. Peters, Matthew R. Olm, Feiqiao B. Yu, Haley Gause, Yue Clare Lou, Brian A. Firek, Robyn Baker, Alexander D. Johnson, Michael J. Morowitz, Robert L. Hettich, Jillian F. Banfield
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-17 (2021)
Abstract Background Candida parapsilosis is a common cause of invasive candidiasis, especially in newborn infants, and infections have been increasing over the past two decades. C. parapsilosis has been primarily studied in pure culture, leaving gaps
Externí odkaz:
https://doaj.org/article/613fb6973098467990e4a5ad5b678134
Autor:
Yue Clare Lou, Matthew R. Olm, Spencer Diamond, Alexander Crits-Christoph, Brian A. Firek, Robyn Baker, Michael J. Morowitz, Jillian F. Banfield
Publikováno v:
Cell Reports Medicine, Vol 2, Iss 9, Pp 100393- (2021)
Summary: Gut microbiome succession affects infant development. However, it remains unclear what factors promote persistence of initial bacterial colonizers in the developing gut. Here, we perform strain-resolved analyses to compare gut colonization o
Externí odkaz:
https://doaj.org/article/2ca86e77c5c748c4acd1cc126bd935ec
Autor:
Matthew R. Olm, Patrick T. West, Brandon Brooks, Brian A. Firek, Robyn Baker, Michael J. Morowitz, Jillian F. Banfield
Publikováno v:
Microbiome, Vol 7, Iss 1, Pp 1-16 (2019)
Abstract Background Fungal infections are a significant cause of mortality and morbidity in hospitalized preterm infants, yet little is known about eukaryotic colonization of infants and of the neonatal intensive care unit as a possible source of col
Externí odkaz:
https://doaj.org/article/9334a745a9494df297257d1594b1c97d
Autor:
Brandon Brooks, Matthew R. Olm, Brian A. Firek, Robyn Baker, David Geller-McGrath, Sophia R. Reimer, Karina R. Soenjoyo, Jennifer S. Yip, Dylan Dahan, Brian C. Thomas, Michael J. Morowitz, Jillian F. Banfield
Publikováno v:
Microbiome, Vol 6, Iss 1, Pp 1-12 (2018)
Abstract Background The neonatal intensive care unit (NICU) contains a unique cohort of patients with underdeveloped immune systems and nascent microbiome communities. Patients often spend several months in the same room, and it has been previously s
Externí odkaz:
https://doaj.org/article/774b8012d1ff40208430861ffe230a97
Autor:
Brandon Brooks, Matthew R. Olm, Brian A. Firek, Robyn Baker, Brian C. Thomas, Michael J. Morowitz, Jillian F. Banfield
Publikováno v:
Nature Communications, Vol 8, Iss 1, Pp 1-7 (2017)
It is thought that the hospital environment may contribute to infant microbiome development. Here, Brooks et al. present a genome-resolved metagenomic study of microbial genotypes from the infant gut and from neonatal intensive care unit rooms, showi
Externí odkaz:
https://doaj.org/article/1eaa7738898045a19202239519e8e768
Autor:
George I. Austin, Heekuk Park, Yoli Meydan, Dwayne Seeram, Tanya Sezin, Yue Clare Lou, Brian A. Firek, Michael J. Morowitz, Jillian F. Banfield, Angela M. Christiano, Itsik Pe’er, Anne-Catrin Uhlemann, Liat Shenhav, Tal Korem
Publikováno v:
Nature Biotechnology.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::30f9a351508e32d073aee60b75242f44
https://doi.org/10.1038/s41587-023-01696-w
https://doi.org/10.1038/s41587-023-01696-w
Autor:
Yue Clare Lou, Jordan Hoff, Matthew R. Olm, Jacob West-Roberts, Spencer Diamond, Brian A. Firek, Michael J. Morowitz, Jillian F. Banfield
Background Metagenomics analyses can be negatively impacted by DNA contamination. While external sources of contamination such as DNA extraction kits have been widely reported and investigated, contamination originating within the study itself remain
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fa1ce5598a780a666e008f6b471561f6
https://doi.org/10.1101/2022.01.16.476537
https://doi.org/10.1101/2022.01.16.476537
Autor:
Timothy W Hand, Kathyayini Gopalakrishna, Benjamin R Macadangdang, Matthew Rogers, Justin T Tometich, Junyi Ji, Brian A Firek, Robyn Baker, Ansen H.P. Burr, Congrong Ma, Misty Good, Michael Morowitz
Publikováno v:
The Journal of Immunology. 202:192.10-192.10
Neonates are particularly susceptible to infection by colonizing microbes, and mammals protect their offspring via antibodies secreted into breast milk. Necrotizing Enterocolitis(NEC) is a disease of preterm infants characterized by intestinal epithe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::cf474be9a09985e93eaf4f042f2a1c8b
https://doi.org/10.4049/jimmunol.202.supp.192.10
https://doi.org/10.4049/jimmunol.202.supp.192.10
Autor:
Kenneth W. Bayles, Toni G. Patton, Kelly C. Rice, Brian A. Firek, Jeremy B. Nelson, Soo Jin Yang
Publikováno v:
Journal of Bacteriology. 185:2635-2643
Bacterial murein hydrolases, or autolysins, comprise a broad and diverse family of enzymes that specifically cleave structural components of the bacterial cell wall. These enzymes have been shown previously to participate in a number of important bio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::19b988050258034a11e66ccb1241da8b
https://doi.org/10.1128/jb.185.8.2635-2643.2003
https://doi.org/10.1128/jb.185.8.2635-2643.2003