Zobrazeno 1 - 10 of 32 pro vyhledávání: '"Breton, Gwenna"'
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Akademický článek
Comparison of sequencing data processing pipelines and application to underrepresented African human populations.
Autor: Breton, Gwenna1 (AUTHOR) gwenna.breton@ebc.uu.se, Johansson, Anna C. V.2 (AUTHOR), Sjödin, Per1 (AUTHOR), Schlebusch, Carina M.1,3,4 (AUTHOR), Jakobsson, Mattias1,3,4 (AUTHOR) mattias.jakobsson@ebc.uu.se
Publikováno v: BMC Bioinformatics. 10/9/2021, Vol. 22 Issue 1, p1-24. 24p.
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Additional file 5 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 5. Most variants are common to ���BP2019���, ���BP2015��� and ���3mask��� after applying an accessibility mask. Venn diagrams of the variants obtained by three processing pipelines, when restricting
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::62527a3a8d3887e71056e333421dc843
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Additional file 8 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 8. Box plots of the percentage of known simple indels by individual, according to ancestry or dataset. Percentage of known simple indels (relative to dbSNP v.151) in ���BP2019��� (before VQSR). A-Individuals are grouped by
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1532118e4678d88c1bec0e0f9c3d21aa
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Additional file 1 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 1. Comparison of high coverage whole genome processing pipelines in 29 studies. Extended description of the high coverage whole genome processing pipelines summarized in Main Table 1
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3a78f6ef69253a8865e7339f49c4f412
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7
Archaeogenetics
Autor: Navascués, Miguel, Fraser, Magdalena, Hollfelder, Nina, Lankheet, Imke, Peyroteo Stjerna, Rita, Burgarella, Concetta, Breton, Gildas, Breton, Gwenna, Breton, Katell, Mckenna, James, de Navascués, Enrico, Sümer, Arev
Movie produced for the outreach event SciFest (scifest.se) in Uppsala. Film about the investigation of an archaeological site where different approaches were used, including ancient DNA study. Everything starts with the excavation of a funeral mound:
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______166::0655abe14c5155dedfb4e43a6cfff38b
https://hal.inrae.fr/hal-03153250
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Additional file 9 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 9. Genome coverage is a function of average sequencing depth. Percentage of the genome covered by at least 15X per individual in ���BP2019���, against the average sequencing depth. Dots are coloured by ancestry
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::30ec3389af397d36fb89752ddb4575ef
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Additional file 6 of Comparison of sequencing data processing pipelines and application to underrepresented African human populations
Autor: Breton, Gwenna, Johansson, Anna C. V., Sj��din, Per, Schlebusch, Carina M., Jakobsson, Mattias
Additional file 6. Differences in number of indels per individual are explained by dataset rather than ancestry. Boxplots of the difference between the number of indels (simple and complex) per individual in ���3mask��� and ���BP201
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5013303fafa6bd51cf72245c206d7dab
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