Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Brent Nowinski"'
Autor:
Daniel Hakim, Stephen Wandro, Karsten Zengler, Livia S. Zaramela, Brent Nowinski, Austin Swafford, Qiyun Zhu, Se Jin Song, Antonio Gonzalez, Daniel McDonald, Rob Knight
Publikováno v:
mSystems, Vol 7, Iss 5 (2022)
ABSTRACT Assigning taxonomy remains a challenging topic in microbiome studies, due largely to ambiguity of reads which overlap multiple reference genomes. With the Web of Life (WoL) reference database hosting 10,575 reference genomes and growing, the
Externí odkaz:
https://doaj.org/article/eecc9545c0544bd6bcd9a83695bfda89
Autor:
Douglas Hanes, Brent Nowinski, Joseph J. Lamb, Ilona A. Larson, Daniel McDonald, Rob Knight, Se Jin Song, Noelle Patno
Publikováno v:
Frontiers in Nutrition, Vol 9 (2022)
The gastrointestinal (GI) impact of fibers including resistant starch (RS) consumption depends on various types and amounts of fibers, the initial microbiome states, and accurate intake measurements. A randomized clinical trial evaluated the GI impac
Externí odkaz:
https://doaj.org/article/093d9e9a85d84ac19af8176ad715836f
Autor:
Brent Nowinski, Xiaoyuan Feng, Christina M. Preston, James M. Birch, Haiwei Luo, William B. Whitman, Mary Ann Moran
Publikováno v:
The ISME Journal. 17:813-822
Identifying mechanisms by which bacterial species evolve and maintain genomic diversity is particularly challenging for the uncultured lineages that dominate the surface ocean. A longitudinal analysis of bacterial genes, genomes, and transcripts duri
Autor:
Mary Ann Moran, Frank X. Ferrer‐González, He Fu, Brent Nowinski, Malin Olofsson, McKenzie A. Powers, Jeremy E. Schreier, William F. Schroer, Christa B. Smith, Mario Uchimiya
Publikováno v:
Limnology and Oceanography. 67:1007-1021
Scalable power analysis and effect size exploration of microbiome community differences with Evident
Autor:
Gibraan Rahman, Daniel McDonald, Antonio Gonzalez, Yoshiki Vázquez-Baeza, Lingjing Jiang, Climent Casals-Pascual, Shyamal Peddada, Daniel Hakim, Amanda Hazel Dilmore, Brent Nowinski, Rob Knight
Differentiating microbial communities among samples is a major objective in biomedicine. Quantifying the effect size of these differences allows researchers to understand the factors most associated with communities and to optimize the design and cli
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d4865a49b22ef1bb4809c654117cb3ba
https://doi.org/10.1101/2022.05.19.492684
https://doi.org/10.1101/2022.05.19.492684
Autor:
John P. Ryan, Mary Ann Moran, James M. Birch, Roman Marin, Brent Nowinski, Christopher A. Scholin, Christina M. Preston, Ronald P. Kiene, Kaitlin Esson
Publikováno v:
Geophysical Research Letters. 46:12279-12288
Autor:
Mary Ann Moran, Brent Nowinski, Alexey Vorobev, Shalabh Sharma, Kaitlin Esson, Bryndan P. Durham, Torben Nielsen, Ronald P. Kiene, Marine Landa, Andrew S. Burns
Publikováno v:
ISME J
Unlike biologically available nitrogen and phosphorus, which are often at limiting concentrations in surface seawater, sulfur in the form of sulfate is plentiful and not considered to constrain marine microbial activity. Nonetheless, in a model syste
Autor:
Jessie Motard-Côté, Christina M. Preston, Christopher A. Scholin, Marine Landa, Brent Nowinski, Ronald P. Kiene, James M. Birch, Mary Ann Moran
Publikováno v:
Environmental Microbiology. 21:1687-1701
Dimethylsulfoniopropionate (DMSP) is an abundant organic sulfur metabolite produced by many phytoplankton species and degraded by bacteria via two distinct pathways with climate-relevant implications. We assessed the diversity and abundance of bacter
Autor:
Nicole Litwin, Kalen Cantrell, Aurelie Cotillard, Muriel Derrien, Abigail Johnson, Rob Knight, Franck Lejzerowicz, Daniel McDonald, Brent Nowinski, Se Jin Song, Julien Tap, Patrick Veiga
Publikováno v:
Current Developments in Nutrition. 6:774
Autor:
Mary Ann Moran, Brent Nowinski
Publikováno v:
Nature microbiology. 6(4)
Niche theory is a foundational ecological concept that explains the distribution of species in natural environments. Identifying the dimensions of any organism’s niche is challenging because numerous environmental factors can affect organism viabil