Zobrazeno 1 - 7
of 7
pro vyhledávání: '"Braden J. Woodhouse"'
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Figure S2: Breakpoints in 10x Loupe software linked-reads view.Each bar represents a sequencing read, and those joined with a horizontal line share the same barcode.Reads are grouped by haplotype (green and purple), with unphased reads
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::66d84f12ed5f22174454d0b0190754bd
https://doi.org/10.1158/2767-9764.22546077
https://doi.org/10.1158/2767-9764.22546077
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Figure S4: Absence of ARID1A variant in targeted panel sequencing of Biopsy 1 despite adequate depth Top panel shows Biopsy 1 targeted panel sequencing. Bottom panel shows representative tumor sampled at autopsy (Sc6) with heterozygous
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::220f224c2d131450969b0ad5043b968a
https://doi.org/10.1158/2767-9764.22546071.v1
https://doi.org/10.1158/2767-9764.22546071.v1
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Figure S1: ADTEx copy number analysis of Biopsy 1 from low coverage WES Copy number profile of low-coverage WES of Biopsy 1 revealing A, likely amplification of Chr 5 and B, loss of Chr 21. Top panels display DOC ratio, colored by predi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::748c218ba10eecd9476540b3f4f4f35a
https://doi.org/10.1158/2767-9764.22546080
https://doi.org/10.1158/2767-9764.22546080
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Figure S6: ctDNA detection of private variants While only four private variants were reported by the sequencing platform’s IonReporter software (indicated in orange, key top right), there were sequencing reads to support other private
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::85de274fa56223f3d70227f82e9152b6
https://doi.org/10.1158/2767-9764.22546065.v1
https://doi.org/10.1158/2767-9764.22546065.v1
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Table S1 includes a description of the tumour samples analysed.Supplementary Table S2 includes DNA WES summary statistics.Supplementary Table S3 includes RNA-Seq summary statistics.Supplementary Table S4 includes WGS linked-read summary
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7df6a8d627b5b3b3f2fa7c963e172c56
https://doi.org/10.1158/2767-9764.22546062
https://doi.org/10.1158/2767-9764.22546062
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Supplementary Figure S3: Mutational signatures across all samples collected at autopsy A, Overall mutational burden does not reveal significant mutational signatures (MuSiCa). The signature contribution is indicated by the degree of shading (key to r
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::053e79be7b1de63bbd5df302c57b8075
https://doi.org/10.1158/2767-9764.22546074.v1
https://doi.org/10.1158/2767-9764.22546074.v1
Autor:
Cristin G. Print, Cherie Blenkiron, Ben Lawrence, Kate Parker, Jane Reeve, Polona Le Quesne Stabej, Esther Coats, Braden J. Woodhouse, Nicole Kramer, Jacklyn Ting, Rexson Tse, Ben Curran, Vicky Fan, Rachna Patel, Pascalene S. Houseman, Paula Shields, Sandra Fitzgerald, Peter Tsai, Tamsin J. Robb
Tumor evolution underlies many challenges facing precision oncology, and improving our understanding has the potential to improve clinical care. This study represents a rare opportunity to study tumor heterogeneity and evolution in a patient with an
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::22815d967dc13e6fe7e7a304f59c9b7d
https://doi.org/10.1158/2767-9764.c.6551082.v1
https://doi.org/10.1158/2767-9764.c.6551082.v1