The Saccharina latissima microbiome: Effects of region, season, and physiology

Autor: Burgunter-Delamare, Bertille, Rousvoal, S, Lageay, E, Tanguy, G, Fredriksen, Stein, Boyen, C, Dittami, Simon

Publikováno v: Burgunter-Delamare, Bertille Rousvoal, S Lageay, E Tanguy, G Fredriksen, Stein Boyen, C Dittami, Simon . The Saccharina latissima microbiome: Effects of region, season, and physiology. Frontiers in Microbiology. 2023
Frontiers in Microbiology

Externí odkaz: http://hdl.handle.net/10852/106834

Insights into the potential for mutualistic and harmful host-microbe interactions affecting brown alga freshwater acclimation.

Autor: KleinJan H; Station Biologique de Roscoff, Laboratory of Integrative Biology of Marine Models, Sorbonne University, CNRS, Roscoff, France.; CEBEDEAU, Research and Expertise Centre for Water, Quartier Polytech 1, Liège, Belgium., Frioux C; Inria, CNRS, IRISA, University of Rennes, Rennes, France.; Inria, University of Bordeaux, INRAE, Talence, France., Califano G; Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Jena, Germany., Aite M; Inria, CNRS, IRISA, University of Rennes, Rennes, France., Fremy E; Inria, CNRS, IRISA, University of Rennes, Rennes, France., Karimi E; Station Biologique de Roscoff, Laboratory of Integrative Biology of Marine Models, Sorbonne University, CNRS, Roscoff, France., Corre E; Station Biologique, FR2424, ABiMS, Sorbonne Université, CNRS, Roscoff, France., Wichard T; Institute for Inorganic and Analytical Chemistry, Friedrich Schiller University Jena, Jena, Germany., Siegel A; Inria, CNRS, IRISA, University of Rennes, Rennes, France., Boyen C; Station Biologique de Roscoff, Laboratory of Integrative Biology of Marine Models, Sorbonne University, CNRS, Roscoff, France., Dittami SM; Station Biologique de Roscoff, Laboratory of Integrative Biology of Marine Models, Sorbonne University, CNRS, Roscoff, France.

Publikováno v: Molecular ecology [Mol Ecol] 2023 Feb; Vol. 32 (3), pp. 703-723. Date of Electronic Publication: 2022 Nov 23.

Effects of sampling and storage procedures on 16S rDNA amplicon sequencing results of kelp microbiomes.

Autor: Burgunter-Delamare B; CNRS, Sorbonne Université, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France. Electronic address: bertille.burgunter-delamare@sb-roscoff.fr., Tanguy G; CNRS, Sorbonne Université, FR2424 Station Biologique de Roscoff, 29680 Roscoff, France., Legeay E; CNRS, Sorbonne Université, FR2424 Station Biologique de Roscoff, 29680 Roscoff, France., Boyen C; CNRS, Sorbonne Université, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; CNRS, Sorbonne Université, FR2424 Station Biologique de Roscoff, 29680 Roscoff, France., Dittami SM; CNRS, Sorbonne Université, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France. Electronic address: simon.dittami@sb-roscoff.fr.

Publikováno v: Marine genomics [Mar Genomics] 2022 Jun; Vol. 63, pp. 100944. Date of Electronic Publication: 2022 Mar 14.

Candidate genes involved in biosynthesis and degradation of the main extracellular matrix polysaccharides of brown algae and their probable evolutionary history.

Autor: Mazéas, Lisa¹ (AUTHOR), Bouguerba-Collin, Ahlem¹ (AUTHOR), Cock, J. Mark¹ (AUTHOR), Denoeud, France² (AUTHOR), Godfroy, Olivier¹ (AUTHOR), Brillet-Guéguen, Loraine^1,3 (AUTHOR), Barbeyron, Tristan¹ (AUTHOR), Lipinska, Agnieszka P.⁴ (AUTHOR), Delage, Ludovic¹ (AUTHOR), Corre, Erwan³ (AUTHOR), Drula, Elodie^5,6,7 (AUTHOR), Henrissat, Bernard^5,6,8 (AUTHOR), Czjzek, Mirjam¹ (AUTHOR), Terrapon, Nicolas^5,6 (AUTHOR), Hervé, Cécile¹ (AUTHOR) cecile.herve@sb-roscoff.fr

Publikováno v: BMC Genomics. 10/10/2024, Vol. 25 Issue 1, p1-19. 19p.

The genome of Ectocarpus subulatus - A highly stress-tolerant brown alga.

Autor: Dittami SM; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France. Electronic address: simon.dittami@sb-roscoff.fr., Corre E; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Brillet-Guéguen L; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Lipinska AP; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Pontoizeau N; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Aite M; Univ Rennes, Inria, CNRS, IRISA, 35000 Rennes, France., Avia K; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; Université de Strasbourg, INRA, SVQV UMR-A 1131, F-68000 Colmar, France., Caron C; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Cho CH; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea., Collén J; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Cormier A; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Delage L; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Doubleau S; IRD, UMR DIADE, 911 Avenue Agropolis, BP 64501, 34394 Montpellier, France., Frioux C; Univ Rennes, Inria, CNRS, IRISA, 35000 Rennes, France., Gobet A; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., González-Navarrete I; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain., Groisillier A; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Hervé C; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Jollivet D; Sorbonne Université, CNRS, Adaptation and Diversity in the Marine Environment (ADME), Station Biologique de Roscoff (SBR), 29680 Roscoff, France., KleinJan H; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Leblanc C; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Liu X; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Marie D; Sorbonne Université, CNRS, Adaptation and Diversity in the Marine Environment (ADME), Station Biologique de Roscoff (SBR), 29680 Roscoff, France., Markov GV; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Minoche AE; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain; Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany., Monsoor M; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Pericard P; CNRS, Sorbonne Université, FR2424, ABiMS platform, Station Biologique de Roscoff, 29680 Roscoff, France., Perrineau MM; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; Scottish Association for Marine Science, Scottish Marine Institute, Oban PA37 1QA, United Kingdom., Peters AF; Bezhin Rosko, 40 Rue des Pêcheurs, 29250 Santec, France., Siegel A; Univ Rennes, Inria, CNRS, IRISA, 35000 Rennes, France., Siméon A; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Trottier C; Univ Rennes, Inria, CNRS, IRISA, 35000 Rennes, France; Laboratory of Digital Sciences of Nantes (LS2N) - University of Nantes, France., Yoon HS; Department of Biological Sciences, Sungkyunkwan University, Suwon 16419, Republic of Korea., Himmelbauer H; Centre for Genomic Regulation (CRG), The Barcelona Institute of Science and Technology, Dr. Aiguader 88, Barcelona 08003, Spain; Max Planck Institute for Molecular Genetics, 14195 Berlin, Germany; Department of Biotechnology, University of Natural Resources and Life Sciences (BOKU), Vienna, 1190 Vienna, Austria., Boyen C; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France., Tonon T; Sorbonne Université, CNRS, Integrative Biology of Marine Models (LBI2M), Station Biologique de Roscoff, 29680 Roscoff, France; Centre for Novel Agricultural Products, Department of Biology, University of York, York YO10 5DD, United Kingdom.

Publikováno v: Marine genomics [Mar Genomics] 2020 Aug; Vol. 52, pp. 100740. Date of Electronic Publication: 2020 Jan 11.