Structural Polymorphism of the Cytoskeleton: A Model of Linker-Assisted Filament Aggregation

Autor: Borukhov, Itamar, Bruinsma, Robijn F., Gelbart, William M., Liu, Andrea J.

Publikováno v: Proc. Natl. Acad. Sci., vol. 102, 3673-3678 (2005)

The phase behavior of charged rods in the presence of inter-rod linkers is studied theoretically as a model for the equilibrium behavior underlying the organization of actin filaments by linker proteins in the cytoskeleton. The presence of linkers in

Externí odkaz: http://arxiv.org/abs/cond-mat/0504708

Effect of Mono- and Multivalent Salts on Angle-dependent Attractions between Charged Rods

Autor: Lee, Kun-Chun, Borukhov, Itamar, Gelbart, William M., Liu, Andrea J., Stevens, Mark J.

Publikováno v: Phys. Rev. Lett. 93, 128101 (2004)

Using molecular dynamics simulations we examine the effective interactions between two like-charged rods as a function of angle and separation. In particular, we determine how the competing electrostatic repulsions and multivalent-ion-induced attract

Externí odkaz: http://arxiv.org/abs/cond-mat/0311429

Peptides Modulating Conformational Changes in Secreted Chaperones: From in Silico Design to Preclinical Proof of Concept

Autor: Kliger, Yossef, Levy, Ofer, Oren, Anat, Ashkenazy, Haim, Tiran, Zohar, Novik, Amit, Rosenberg, Avi, Amir, Anat, Wool, Assaf, Toporik, Amir, Schreiber, Ehud, Eshel, Dani, Levine, Zurit, Cohen, Yossi, Nold-Petry, Claudia, Dinarello, Charles A., Borukhov, Itamar

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America, 2009 Aug . 106(33), 13797-13801.

Externí odkaz: https://www.jstor.org/stable/40484321

MOESM2 of The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens

Autor: Naihui Zhou, Yuxiang Jiang, Bergquist, Timothy, Lee, Alexandra, Balint Kacsoh, Crocker, Alex, Lewis, Kimberley, Georghiou, George, Nguyen, Huy, Md Nafiz Hamid, Davis, Larry, Tunca Dogan, Atalay, Volkan, Rifaioglu, Ahmet, Dalkıran, Alperen, Rengul Cetin Atalay, Chengxin Zhang, Hurto, Rebecca, Freddolino, Peter, Zhang, Yang, Prajwal Bhat, Supek, Fran, Fernández, José, Gemovic, Branislava, Perovic, Vladimir, Davidović, Radoslav, Sumonja, Neven, Veljkovic, Nevena, Ehsaneddin Asgari, Mofrad, Mohammad, Profiti, Giuseppe, Castrense Savojardo, Martelli, Pier Luigi, Casadio, Rita, Boecker, Florian, Schoof, Heiko, Indika Kahanda, Thurlby, Natalie, McHardy, Alice, Renaux, Alexandre, Saidi, Rabie, Gough, Julian, Freitas, Alex, Antczak, Magdalena, Fabris, Fabio, Wass, Mark, Hou, Jie, Jianlin Cheng, Wang, Zheng, Romero, Alfonso, Paccanaro, Alberto, Haixuan Yang, Goldberg, Tatyana, Chenguang Zhao, Holm, Liisa, Törönen, Petri, Medlar, Alan, Zosa, Elaine, Borukhov, Itamar, Novikov, Ilya, Wilkins, Angela, Lichtarge, Olivier, Po-Han Chi, Tseng, Wei-Cheng, Linial, Michal, Rose, Peter, Dessimoz, Christophe, Vidulin, Vedrana, Saso Dzeroski, Sillitoe, Ian, Sayoni Das, Lees, Jonathan Gill, Jones, David, Wan, Cen, Cozzetto, Domenico, Fa, Rui, Torres, Mateo, Vesztrocy, Alex Warwick, Rodriguez, Jose Manuel, Tress, Michael, Frasca, Marco, Notaro, Marco, Grossi, Giuliano, Petrini, Alessandro, Re, Matteo, Valentini, Giorgio, Mesiti, Marco, Roche, Daniel, Reeb, Jonas, Ritchie, David, Sabeur Aridhi, Alborzi, Seyed Ziaeddin, Marie-Dominique Devignes, Koo, Da Chen Emily, Bonneau, Richard, Gligorijević, Vladimir, Meet Barot, Fang, Hai, Toppo, Stefano, Lavezzo, Enrico, Falda, Marco, Berselli, Michele, Tosatto, Silvio, Carraro, Marco, Piovesan, Damiano, Hafeez Ur Rehman, Qizhong Mao, Shanshan Zhang, Vucetic, Slobodan, Black, Gage, Jo, Dane, Suh, Erica, Dayton, Jonathan, Larsen, Dallas, Omdahl, Ashton, McGuffin, Liam, Brackenridge, Danielle, Babbitt, Patricia, Yunes, Jeffrey, Fontana, Paolo, Zhang, Feng, Shanfeng Zhu, Ronghui You, Zihan Zhang, Suyang Dai, Shuwei Yao, Weidong Tian, Renzhi Cao, Chandler, Caleb, Amezola, Miguel, Johnson, Devon, Chang, Jia-Ming, Wen-Hung Liao, Liu, Yi-Wei, Pascarelli, Stefano, Yotam Frank, Hoehndorf, Robert, Kulmanov, Maxat, Boudellioua, Imane, Politano, Gianfranco, Carlo, Stefano Di, Benso, Alfredo, Hakala, Kai, Ginter, Filip, Mehryary, Farrokh, Suwisa Kaewphan, Björne, Jari, Moen, Hans, Tolvanen, Martti, Salakoski, Tapio, Kihara, Daisuke, Aashish Jain, Šmuc, Tomislav, Altenhoff, Adrian, Ben-Hur, Asa, Rost, Burkhard, Brenner, Steven, Orengo, Christine, Jeffery, Constance, Bosco, Giovanni, Hogan, Deborah, Martin, Maria, O’Donovan, Claire, Mooney, Sean, Greene, Casey, Radivojac, Predrag, Friedberg, Iddo

Additional file 2 Review History.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1d9c48ea7ca57f4de6e206ea89173185

Association of two semiflexible polyelectrolytes by interchain linkers: Theory and simulations.

Autor: Borukhov, Itamar, Lee, Kun-Chun, Bruinsma, Robijn F., Gelbart, William M., Liu, Andrea J., Stevens, Mark J.

Publikováno v: Journal of Chemical Physics; 7/1/2002, Vol. 117 Issue 1, p462, 19p, 5 Diagrams, 7 Graphs