Zobrazeno 1 - 10
of 82
pro vyhledávání: '"Booth, BW"'
Publikováno v:
Wan, KH; Yu, C; Park, S; Hammonds, AS; Booth, BW; & Celniker, SE. (2017). Complete genome sequence of Bacillus kochii Oregon-R-modENCODE strain BDGP4, isolated from Drosophila melanogaster gut. Genome Announcements, 5(40). doi: 10.1128/genomeA.01074-17. Lawrence Berkeley National Laboratory: Retrieved from: http://www.escholarship.org/uc/item/5mg6d9jc
© 2017 Wan et al. Bacillus kochii Oregon-R-modENCODE strain BDGP4 was isolated from the gut of Drosophila melanogaster for functional host microbial interaction studies. The complete genome comprised a single chromosomal circle of 4,557,232 bp with
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::9ccd2a7d8fc6ecf81878ec316c335e10
http://www.escholarship.org/uc/item/5mg6d9jc
http://www.escholarship.org/uc/item/5mg6d9jc
Autor:
Brooks, AN, Duff, MO, May, G, Yang, L, Bolisetty, M, Landolin, J, Wan, K, Sandler, J, Booth, BW, Celniker, SE, Graveley, BR, Brenner, SE
Publikováno v:
Genome research, vol 25, iss 11
Brooks, AN; Duff, MO; May, G; Yang, L; Bolisetty, M; Landolin, J; et al.(2015). Regulation of alternative splicing in Drosophila by 56 RNA binding proteins. Genome Research, 25(11), 1771-1780. doi: 10.1101/gr.192518.115. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/5664w1xs
Brooks, AN; Duff, MO; May, G; Yang, L; Bolisetty, M; Landolin, J; et al.(2015). Regulation of alternative splicing in Drosophila by 56 RNA binding proteins. Genome Research, 25(11), 1771-1780. doi: 10.1101/gr.192518.115. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/5664w1xs
© 2015 Brooks et al. Alternative splicing is regulated by RNA binding proteins (RBPs) that recognize pre-mRNA sequence elements and activate or repress adjacent exons. Here, we used RNA interference and RNA-seq to identify splicing events regulated
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::4e6fb5b40574de54d5633d337096c432
https://escholarship.org/uc/item/5664w1xs
https://escholarship.org/uc/item/5664w1xs
Autor:
Gerstein, MB, Rozowsky, J, Yan, KK, Wang, D, Cheng, C, Brown, JB, Davis, CA, Hillier, L, Sisu, C, Li, JJ, Pei, B, Harmanci, AO, Duff, MO, Djebali, S, Alexander, RP, Alver, BH, Auerbach, R, Bell, K, Bickel, PJ, Boeck, ME, Boley, NP, Booth, BW, Cherbas, L, Cherbas, P, Di, C, Dobin, A, Drenkow, J, Ewing, B, Fang, G, Fastuca, M, Feingold, EA, Frankish, A, Gao, G, Good, PJ, Guigó, R, Hammonds, A, Harrow, J, Hoskins, RA, Howald, C, Hu, L, Huang, H, Hubbard, TJP, Huynh, C, Jha, S, Kasper, D, Kato, M, Kaufman, TC, Kitchen, RR, Ladewig, E, Lagarde, J, Lai, E, Leng, J, Lu, Z, MacCoss, M, May, G, McWhirter, R, Merrihew, G, Miller, DM, Mortazavi, A, Murad, R, Oliver, B, Olson, S, Park, PJ, Pazin, MJ, Perrimon, N, Pervouchine, D, Reinke, V, Reymond, A, Robinson, G
Publikováno v:
Gerstein, MB; Rozowsky, J; Yan, KK; Wang, D; Cheng, C; Brown, JB; et al.(2014). Comparative analysis of the transcriptome across distant species. Nature, 512(7515), 445-448. doi: 10.1038/nature13424. UC Berkeley: Retrieved from: http://www.escholarship.org/uc/item/7w33f659
The transcriptome is the readout of the genome. Identifying common features in it across distant species can reveal fundamental principles. To this end, the ENCODE and modENCODE consortia have generated large amounts of matched RNA-sequencing data fo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od_______325::3715f93c4e6a4bf38a0b9dfb59e10efc
http://www.escholarship.org/uc/item/7w33f659
http://www.escholarship.org/uc/item/7w33f659
Akademický článek
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Publikováno v:
New England Journal of Medicine. 305:170-170
Autor:
Booth BW, Newcomb DC, McKane SA, Crews AL, Adler KB, Bonner JC, Martin LD, Booth, Brian W, Newcomb, Dawn C, McKane, Shaun A, Crews, Anne L, Adler, Kenneth B, Bonner, James C, Martin, Linda D
Publikováno v:
CHEST; Mar2003 Supplement, Vol. 123, p384S-5S, 1p
Autor:
Yeshchenko O; Physics Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine., Khort P; Physics Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine., Fedotov O; Physics Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine., Chumachenko V; Chemistry Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine., Virych P; Chemistry Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine., Warren HS; Department of Bioengineering, Clemson University, Clemson, SC 29634, USA., Booth BW; Department of Bioengineering, Clemson University, Clemson, SC 29634, USA., Bliznyuk V; Department of Environmental Engineering and Earth Science, Clemson University, Clemson, SC 29634, USA., Kutsevol N; Chemistry Department, Taras Shevchenko National University of Kyiv, 60 Volodymyrska Str., 01601 Kyiv, Ukraine.
Publikováno v:
Molecules (Basel, Switzerland) [Molecules] 2024 May 09; Vol. 29 (10). Date of Electronic Publication: 2024 May 09.
Autor:
Adler A; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Bader JS; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Basnight B; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Booth BW; Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Cai J; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Cho E; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Collins JH; Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, United States., Ge Y; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Grothendieck J; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Keating K; Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, United States., Marshall T; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Persikov A; Department of Computer Science, Princeton University, Princeton, New Jersey 08544, United States., Scott H; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Siegelmann R; Department of Biomedical Engineering, Johns Hopkins University, Baltimore, Maryland 21218, United States., Singh M; Department of Computer Science, Princeton University, Princeton, New Jersey 08544, United States., Taggart A; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Toll B; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Wan KH; Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Wyschogrod D; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Yaman F; Raytheon BBN, Cambridge, Massachusetts 02138, United States., Young EM; Department of Chemical Engineering, Worcester Polytechnic Institute, Worcester, Massachusetts 01609, United States., Celniker SE; Lawrence Berkeley National Laboratory, Berkeley, California 94720, United States., Roehner N; Raytheon BBN, Cambridge, Massachusetts 02138, United States.
Publikováno v:
ACS synthetic biology [ACS Synth Biol] 2024 Apr 19; Vol. 13 (4), pp. 1105-1115. Date of Electronic Publication: 2024 Mar 12.
Autor:
Frank-Kamenetskii A; Department of Bioengineering, Clemson University, Clemson, SC, USA., Mook J; Department of Biological Sciences, Clemson University, Clemson, SC, USA., Reeves M; Department of Bioengineering, Clemson University, Clemson, SC, USA., Boulanger CA; Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Meyer TJ; CCR Collaborative Bioinformatics Resource, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA.; Advanced Biomedical Computational Science, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Ragle L; Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Jordan HC; Department of Bioengineering, Clemson University, Clemson, SC, USA., Smith GH; Center for Cancer Research, National Cancer Institute, National Institutes of Health, Bethesda, MD, USA., Booth BW; Department of Bioengineering, Clemson University, Clemson, SC, USA.
Publikováno v:
Oncotarget [Oncotarget] 2023 Sep 28; Vol. 14, pp. 842. Date of Electronic Publication: 2023 Sep 28.
Autor:
Wan KH; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Park S; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Booth BW; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Brydon EC; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Eichenberger J; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Inman JL; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Mao JH; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Snijders AM; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA., Celniker SE; Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory , Berkeley, California, USA.
Publikováno v:
Microbiology resource announcements [Microbiol Resour Announc] 2023 Sep 19; Vol. 12 (9), pp. e0038423. Date of Electronic Publication: 2023 Aug 21.