Výsledky vyhledávání - "Bonnie T. Poulos"

Akademický článek

Towards quantitative viromics for both double-stranded and single-stranded DNA viruses

Autor: Simon Roux, Natalie E. Solonenko, Vinh T. Dang, Bonnie T. Poulos, Sarah M. Schwenck, Dawn B. Goldsmith, Maureen L. Coleman, Mya Breitbart, Matthew B. Sullivan

Publikováno v: PeerJ, Vol 4, p e2777 (2016)

Background Viruses strongly influence microbial population dynamics and ecosystem functions. However, our ability to quantitatively evaluate those viral impacts is limited to the few cultivated viruses and double-stranded DNA (dsDNA) viral genomes ca

Externí odkaz: https://doaj.org/article/70889d9d6d0c46b4a14dde68fed86e9e

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Akademický článek

Contrasting Life Strategies of Viruses That Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging

Autor: Li Deng, Ann Gregory, Suzan Yilmaz, Bonnie T. Poulos, Philip Hugenholtz, Matthew B. Sullivan

Publikováno v: mBio, Vol 4, Iss 1 (2013)

Externí odkaz: https://doaj.org/article/7a9dedfe2eca4e6bbfabff5c7f869181

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Akademický článek

Contrasting Life Strategies of Viruses that Infect Photo- and Heterotrophic Bacteria, as Revealed by Viral Tagging

Autor: Li Deng, Ann Gregory, Suzan Yilmaz, Bonnie T. Poulos, Philip Hugenholtz, Matthew B. Sullivan

Publikováno v: mBio, Vol 3, Iss 6 (2012)

ABSTRACT Ocean viruses are ubiquitous and abundant and play important roles in global biogeochemical cycles by means of their mortality, horizontal gene transfer, and manipulation of host metabolism. However, the obstacles involved in linking viruses

Externí odkaz: https://doaj.org/article/ba5e7315fe404f15bbc283591d68a32a

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Viral elements and their potential influence on microbial processes along the permanently stratified Cariaco Basin redoxcline

Autor: Gordon T. Taylor, Bonnie T. Poulos, Maria G. Pachiadaki, Elizabeth A. Suter, Paraskevi Mara, Dean R. Vik, Virginia P. Edgcomb, Matthew B. Sullivan

Publikováno v: The ISME Journal

Little is known about viruses in oxygen-deficient water columns (ODWCs). In surface ocean waters, viruses are known to act as gene vectors among susceptible hosts. Some of these genes may have metabolic functions and are thus termed auxiliary metabol

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2759b2aebcc51f0312948bb6913fe83d
https://doi.org/10.1038/s41396-020-00739-3

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DNA and RNA backups v1

Autor: Adriana Alberti, Julie Poulain, Stefan Engelen, Karine Labadie, Sarah Romac, Isabel Ferrera, Guillaume Albini, Jean-Marc Aury, Caroline Belser, Alexis Bertrand, Corinne Cruaud, Corinne Da Silva, Carole Dossat, Frédéric Gavory, Shahinaz Gas, Julie Guy, Maud Haquelle, E'krame Jacoby, Olivier Jaillon, Arnaud Lemainque, Eric Pelletier, Gaëlle Samson, Marc Wessner, Genoscope Technical Team, Silvia G. Acinas, Marta Royo-Llonch, Francisco M. Cornejo-Castillo, Ramiro Logares, Beatriz Fernández-Gómez, Chris Bowler, Guy Cochrane, Clara Amid, Petra Ten Hoopen, Colomban De Vargas, Nigel Grimsley, Elodie Desgranges, Stefanie Kandels-Lewis, Hiroyuki Ogata, Nicole Poulton, Michael E. Sieracki, Ramunas Stepanauskas, Matthew B. Sullivan, Jennifer R. Brum, Melissa B. Duhaime, Bonnie T. Poulos, Bonnie L. Hurwitz, Stéphane Pesant, Eric Karsenti, Patrick Wincker

This protocol is part of Nucleic acids preparationsforViral to metazoan marine plankton nucleotide sequences from theTaraOceans expedition.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::74e1d00629c8c27e530b32ef7f75c2d9
https://doi.org/10.17504/protocols.io.qwpdxdn

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Sequencing and data quality control v1

This protocol describes the sequencing and data quality control for theTaraOceans expedition and is part ofViral to metazoan marine plankton nucleotide sequences from theTaraOceans expedition. Figure 3:Overview of experimental pipeline from nucleic a

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::701dad6d7572ca9b6a32d9e006cd6aa5
https://doi.org/10.17504/protocols.io.qwjdxcn

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Sequencing library preparation v1

This protocol describes the sequencing library preparation for theTaraOceans expedition and is part ofViral to metazoan marine plankton nucleotide sequences from theTaraOceans expedition. Figure 1: Overview of -omics analysis strategy applied on Tara

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::57f0a303ae45f0755e191ffaf10d2f14
https://doi.org/10.17504/protocols.io.qwidxce

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Handling of genomics samples v1

This protocol describes the handling of genomics samples for the Tara Oceans expedition and is part ofViral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition. Figure 1: Overview of -omics analysis strategy applied on Ta

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::a6bf81b8df4b73b668223913523e7946
https://doi.org/10.17504/protocols.io.qwfdxbn

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Viral to metazoan marine plankton nucleotide sequences from the Tara Oceans expedition v1

The protocols in this collection are from the Alberti A., et al manuscript (Alberti A. 2017, Scientific Data). These protocols provide detailed procedures applied for genomic data generation, from nucleic acids extraction to sequence production, and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::53216c0fa2301f9b760b502827c69826
https://doi.org/10.17504/protocols.io.qv6dw9e

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